Cow genome map
| Conread name: | LyN1-MLN01G010084 |
| Conread position: | 1-403 |
| Cow position: | chr2:28796465-28796876 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 341 |
| Conread position: | 2-414 |
| Cow position: | chr2:77858951-77859362 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 90 |
| Conread position: | 7-398 |
| Cow position: | chr2:34502392-34502772 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 10-291 |
| Cow position: | chr2:6965557-6965838 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 181, 7 |
| Conread position: | 10-428 |
| Cow position: | chr2:19213133-19212725 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 194, 47 |
| Conread position: | 11-192 |
| Cow position: | chr2:10657211-10657036 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 11-204 |
| Cow position: | chr2:2772355-2772550 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 11-425 |
| Cow position: | chr2:2181640-2181221 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 60 |
| Conread position: | 17-193 |
| Cow position: | chr2:56798686-56798511 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 17-296 |
| Cow position: | chr2:43757006-43756727 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 174, 191 |
| Conread position: | 17-351 |
| Cow position: | chr2:39119238-39119581 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-366 |
| Cow position: | chr2:53332439-53332798 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-374 |
| Cow position: | chr2:9187242-9186887 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 257 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 174, 60 |
| Conread position: | 17-374 |
| Cow position: | chr2:74761516-74761888 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 17-387 |
| Cow position: | chr2:39424568-39424943 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 174, 35 |
| Conread position: | 17-392 |
| Cow position: | chr2:43878542-43878918 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 18 |
| Conread position: | 17-392 |
| Cow position: | chr2:52170037-52170425 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 202 |
| Conread position: | 17-399 |
| Cow position: | chr2:4917433-4917042 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-400 |
| Cow position: | chr2:57338591-57338982 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 368 |
| Conread position: | 17-413 |
| Cow position: | chr2:20870259-20869868 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 61 |
| Conread position: | 17-415 |
| Cow position: | chr2:4805103-4804695 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-421 |
| Cow position: | chr2:53030727-53031131 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 272 |
| Conread position: | 17-423 |
| Cow position: | chr2:9962434-9962019 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-423 |
| Cow position: | chr2:70669346-70669758 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-424 |
| Cow position: | chr2:2603302-2603714 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-424 |
| Cow position: | chr2:46182899-46182484 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 295 |
| Conread position: | 17-424 |
| Cow position: | chr2:62819843-62819429 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 116 |
| Conread position: | 17-425 |
| Cow position: | chr2:383487-383067 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 70 |
| Conread position: | 17-425 |
| Cow position: | chr2:7370304-7370719 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 31 |
| Conread position: | 17-425 |
| Cow position: | chr2:9714306-9714717 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 191 |
| Conread position: | 17-425 |
| Cow position: | chr2:16718268-16717850 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 17-425 |
| Cow position: | chr2:18021271-18020860 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 255 |
| Conread position: | 17-425 |
| Cow position: | chr2:26905883-26906296 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 336 |
| Conread position: | 17-425 |
| Cow position: | chr2:30379913-30380328 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 47 |
| Conread position: | 17-425 |
| Cow position: | chr2:43209776-43210183 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 91 |
| Conread position: | 17-425 |
| Cow position: | chr2:50980519-50980116 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 263 |
| Conread position: | 17-425 |
| Cow position: | chr2:52621412-52621828 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 7 |
| Conread position: | 17-425 |
| Cow position: | chr2:57938032-57938448 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 80 |
| Conread position: | 18-425 |
| Cow position: | chr2:9910916-9911327 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 312 |
| Conread position: | 19-378 |
| Cow position: | chr2:6004197-6003834 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 249 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 172, 72 |
| Conread position: | 19-414 |
| Cow position: | chr2:2410203-2409804 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 266 |
| Conread position: | 19-425 |
| Cow position: | chr2:53542577-53542992 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 20-327 |
| Cow position: | chr2:48360586-48360902 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 68, 97 |
| Conread position: | 21-395 |
| Cow position: | chr2:73992365-73992748 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 24-264 |
| Cow position: | chr2:23492436-23492684 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 31-414 |
| Cow position: | chr2:41156829-41157220 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 224 |
| Conread position: | 34-425 |
| Cow position: | chr2:13603015-13603409 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 63 |
| Conread position: | 35-204 |
| Cow position: | chr2:11694992-11695161 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 159, 62 |
| Conread position: | 38-350 |
| Cow position: | chr2:53174983-53175302 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 231 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 9, 77 |
| Conread position: | 38-398 |
| Cow position: | chr2:29610476-29610794 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 160, 25 |
| Conread position: | 39-312 |
| Cow position: | chr2:38375827-38376112 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 39, 82 |
| Conread position: | 41-375 |
| Cow position: | chr2:50417672-50418010 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 84 |
| Conread position: | 49-425 |
| Cow position: | chr2:32417953-32417580 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 241 |
| Conread position: | 65-421 |
| Cow position: | chr2:27146424-27146059 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 233 |
| Conread position: | 68-399 |
| Cow position: | chr2:17941365-17941023 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 315 |
| Conread position: | 70-421 |
| Cow position: | chr2:30909189-30909547 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 76-426 |
| Cow position: | chr2:80840475-80840117 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 79-425 |
| Cow position: | chr2:78301697-78301350 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 232 |
| Conread position: | 80-425 |
| Cow position: | chr2:67418068-67417717 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 88-374 |
| Cow position: | chr2:50406819-50407104 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 10, 64 |
| Conread position: | 94-425 |
| Cow position: | chr2:9956517-9956177 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 117-392 |
| Cow position: | chr2:46940248-46939977 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 118-425 |
| Cow position: | chr2:41046126-41045814 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 122-392 |
| Cow position: | chr2:943769-944028 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 95, 183 |
| Conread position: | 534-709 |
| Cow position: | chr2:73992745-73992926 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 536-813 |
| Cow position: | chr2:4417024-4416749 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 99, 43 |
| Conread position: | 537-813 |
| Cow position: | chr2:56797973-56797697 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 542-811 |
| Cow position: | chr2:36084043-36084306 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 65, 95 |
| Conread position: | 548-801 |
| Cow position: | chr2:42839033-42838778 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 62, 116 |
Show alignments to all cow chromosomes.