Cow genome map
| Conread name: | LyN1-MLN01G010084 |
| Conread position: | 2-358 |
| Cow position: | chr4:58882577-58882209 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 188, 80 |
| Conread position: | 8-425 |
| Cow position: | chr4:43316836-43316410 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 10-397 |
| Cow position: | chr4:39645565-39645965 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 301 |
| Conread position: | 11-425 |
| Cow position: | chr4:36899193-36899615 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 123 |
| Conread position: | 17-183 |
| Cow position: | chr4:51761171-51761005 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-183 |
| Cow position: | chr4:67681155-67680989 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-253 |
| Cow position: | chr4:63639299-63639059 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 17-348 |
| Cow position: | chr4:4673756-4673417 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 281 |
| Conread position: | 17-374 |
| Cow position: | chr4:10823046-10822685 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 103, 51 |
| Conread position: | 17-377 |
| Cow position: | chr4:14918879-14919227 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 193 |
| Conread position: | 17-399 |
| Cow position: | chr4:30508026-30508411 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 56 |
| Conread position: | 17-414 |
| Cow position: | chr4:17234843-17235247 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 321 |
| Conread position: | 17-421 |
| Cow position: | chr4:67394049-67394460 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 345 |
| Conread position: | 17-423 |
| Cow position: | chr4:606433-606843 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 75 |
| Conread position: | 17-423 |
| Cow position: | chr4:29530635-29530221 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 296 |
| Conread position: | 17-424 |
| Cow position: | chr4:57987566-57987981 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 277 |
| Conread position: | 17-425 |
| Cow position: | chr4:3170103-3170519 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 17-425 |
| Cow position: | chr4:20242978-20243395 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-425 |
| Cow position: | chr4:20657238-20656825 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 34 |
| Conread position: | 17-425 |
| Cow position: | chr4:23150835-23150420 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 314 |
| Conread position: | 17-425 |
| Cow position: | chr4:23525404-23525822 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 31 |
| Conread position: | 17-425 |
| Cow position: | chr4:24139694-24140114 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 17-425 |
| Cow position: | chr4:27288283-27287868 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 17-425 |
| Cow position: | chr4:27337034-27337450 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 17-425 |
| Cow position: | chr4:34712639-34713055 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 322 |
| Conread position: | 17-425 |
| Cow position: | chr4:38583703-38584116 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 323 |
| Conread position: | 17-425 |
| Cow position: | chr4:41961718-41962135 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-425 |
| Cow position: | chr4:42330899-42330492 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 287 |
| Conread position: | 17-425 |
| Cow position: | chr4:43883915-43884332 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-425 |
| Cow position: | chr4:47115657-47116075 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 20-413 |
| Cow position: | chr4:60625703-60625313 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 247 |
| Conread position: | 20-424 |
| Cow position: | chr4:1239593-1239196 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 92 |
| Conread position: | 21-425 |
| Cow position: | chr4:38180586-38180987 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 99 |
| Conread position: | 23-387 |
| Cow position: | chr4:22316553-22316925 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 188 |
| Conread position: | 23-404 |
| Cow position: | chr4:59783505-59783882 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 59 |
| Conread position: | 25-375 |
| Cow position: | chr4:33262-32911 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 126 |
| Conread position: | 32-398 |
| Cow position: | chr4:20090948-20091312 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 103 |
| Conread position: | 32-399 |
| Cow position: | chr4:65918526-65918892 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 152 |
| Conread position: | 32-617 |
| Cow position: | chr4:58859765-58859185 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 65 |
| Conread position: | 49-326 |
| Cow position: | chr4:12454818-12455103 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 58-399 |
| Cow position: | chr4:19140866-19141216 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 64 |
| Conread position: | 67-426 |
| Cow position: | chr4:61449385-61449756 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 77-330 |
| Cow position: | chr4:10553130-10553386 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 114, 39 |
| Conread position: | 84-414 |
| Cow position: | chr4:25578491-25578821 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 31 |
| Conread position: | 102-358 |
| Cow position: | chr4:61724147-61724410 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 5, 89 |
| Conread position: | 105-399 |
| Cow position: | chr4:62569607-62569898 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 86, 177 |
| Conread position: | 110-392 |
| Cow position: | chr4:46667577-46667864 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 89, 44 |
| Conread position: | 119-342 |
| Cow position: | chr4:61191912-61192137 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 72, 89 |
| Conread position: | 122-423 |
| Cow position: | chr4:5441734-5441424 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 140-425 |
| Cow position: | chr4:1006838-1007131 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 57, 113 |
| Conread position: | 154-426 |
| Cow position: | chr4:68108153-68107870 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 62, 137 |
| Conread position: | 531-813 |
| Cow position: | chr4:54110823-54111107 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 50, 186 |
| Conread position: | 533-809 |
| Cow position: | chr4:22316948-22317237 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 538-813 |
| Cow position: | chr4:14230356-14230082 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 75, 62 |
| Conread position: | 539-813 |
| Cow position: | chr4:11201091-11201364 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 29, 11 |
| Conread position: | 540-713 |
| Cow position: | chr4:31772476-31772651 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 72, 11 |
| Conread position: | 541-814 |
| Cow position: | chr4:52086394-52086655 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 79 |
Show alignments to all cow chromosomes.