Cow genome map
| Conread name: | LyN1-MLN01G010084 |
| Conread position: | 1-418 |
| Cow position: | chr9:10678948-10678532 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 7 |
| Conread position: | 2-404 |
| Cow position: | chr9:44168564-44168977 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 262 |
| Conread position: | 9-415 |
| Cow position: | chr9:5517169-5517575 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 53 |
| Conread position: | 10-192 |
| Cow position: | chr9:31077940-31078121 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 11-387 |
| Cow position: | chr9:62443991-62443620 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 95 |
| Conread position: | 11-415 |
| Cow position: | chr9:56862173-56861783 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 20 |
| Conread position: | 11-425 |
| Cow position: | chr9:23421570-23421996 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 293 |
| Conread position: | 17-183 |
| Cow position: | chr9:1249007-1248841 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-261 |
| Cow position: | chr9:43225711-43225462 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 174, 191 |
| Conread position: | 17-295 |
| Cow position: | chr9:14003027-14003306 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 215 |
| Conread position: | 17-300 |
| Cow position: | chr9:10939714-10939996 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 193 |
| Conread position: | 17-390 |
| Cow position: | chr9:34946024-34945642 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 17-392 |
| Cow position: | chr9:30401273-30401656 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 70 |
| Conread position: | 17-399 |
| Cow position: | chr9:2495751-2495360 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 297 |
| Conread position: | 17-406 |
| Cow position: | chr9:3222464-3222852 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 107 |
| Conread position: | 17-414 |
| Cow position: | chr9:47044937-47045343 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-421 |
| Cow position: | chr9:6365367-6365779 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 17-423 |
| Cow position: | chr9:28681190-28681606 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-425 |
| Cow position: | chr9:777824-777404 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 17-425 |
| Cow position: | chr9:5006963-5007372 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 294 |
| Conread position: | 17-425 |
| Cow position: | chr9:7005731-7006147 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 305 |
| Conread position: | 17-425 |
| Cow position: | chr9:10857010-10857439 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 257 |
| Conread position: | 17-425 |
| Cow position: | chr9:28785334-28785749 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 254 |
| Conread position: | 17-425 |
| Cow position: | chr9:31810567-31810984 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-425 |
| Cow position: | chr9:39303563-39303146 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-425 |
| Cow position: | chr9:42868879-42868465 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 37 |
| Conread position: | 17-425 |
| Cow position: | chr9:44203090-44202673 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-425 |
| Cow position: | chr9:47171042-47171460 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 17-425 |
| Cow position: | chr9:50326687-50327103 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 112 |
| Conread position: | 17-425 |
| Cow position: | chr9:53776689-53777098 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 80 |
| Conread position: | 17-425 |
| Cow position: | chr9:54413618-54413203 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 52 |
| Conread position: | 17-425 |
| Cow position: | chr9:59196847-59197254 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 70 |
| Conread position: | 19-425 |
| Cow position: | chr9:2856836-2857250 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 0 |
| Conread position: | 20-227 |
| Cow position: | chr9:17007966-17007756 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 30-399 |
| Cow position: | chr9:19078868-19079245 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 33-395 |
| Cow position: | chr9:30439404-30439771 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 79 |
| Conread position: | 34-399 |
| Cow position: | chr9:3411886-3411514 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 34 |
| Conread position: | 41-425 |
| Cow position: | chr9:18710507-18710899 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 203 |
| Conread position: | 51-425 |
| Cow position: | chr9:3933088-3932703 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 60 |
| Conread position: | 64-227 |
| Cow position: | chr9:30020473-30020636 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 127, 91 |
| Conread position: | 74-280 |
| Cow position: | chr9:25596699-25596913 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 117, 184 |
| Conread position: | 77-425 |
| Cow position: | chr9:2618747-2618378 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 81-415 |
| Cow position: | chr9:1259486-1259833 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 103-276 |
| Cow position: | chr9:24725676-24725852 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 132, 104 |
| Conread position: | 121-414 |
| Cow position: | chr9:26576795-26577087 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 109, 88 |
| Conread position: | 125-395 |
| Cow position: | chr9:46670029-46670304 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 68, 147 |
| Conread position: | 534-788 |
| Cow position: | chr9:30477035-30477285 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 77, 17 |
| Conread position: | 534-813 |
| Cow position: | chr9:9405265-9405550 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 534-828 |
| Cow position: | chr9:37100617-37100917 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 78, 196 |
| Conread position: | 540-694 |
| Cow position: | chr9:20959191-20959346 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 68, 11 |
| Conread position: | 540-813 |
| Cow position: | chr9:30401669-30401939 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 68, 11 |
| Conread position: | 541-678 |
| Cow position: | chr9:44107454-44107591 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 71, 10 |
| Conread position: | 548-786 |
| Cow position: | chr9:18420121-18419883 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 64, 90 |
| Conread position: | 548-813 |
| Cow position: | chr9:34696546-34696818 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 64, 216 |
| Conread position: | 549-813 |
| Cow position: | chr9:62131440-62131698 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 131, 63 |
| Conread position: | 589-827 |
| Cow position: | chr9:20401219-20401461 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 216 |
Show alignments to all cow chromosomes.