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Cow genome map

           
Conread name:
           
LyN1-MLN01G030059
        

               
Conread position:
               
14-205
               

               
Cow position:
               
chr20:9433478-9433659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
113, 28
               

               
Conread position:
               
14-207
               

               
Cow position:
               
chr20:40256859-40257044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
15-125
               

               
Cow position:
               
chr20:13994705-13994809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
15-187
               

               
Cow position:
               
chr20:32636675-32636516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
15-207
               

               
Cow position:
               
chr20:22313266-22313086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
134, 27
               

               
Conread position:
               
15-207
               

               
Cow position:
               
chr20:31289390-31289584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
15-207
               

               
Cow position:
               
chr20:33067481-33067286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
15-207
               

               
Cow position:
               
chr20:34777076-34777254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
15-207
               

               
Cow position:
               
chr20:35958537-35958722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
15-209
               

               
Cow position:
               
chr20:30817427-30817615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
124, 28
               

               
Conread position:
               
15-212
               

               
Cow position:
               
chr20:14735568-14735748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
16-203
               

               
Cow position:
               
chr20:8429638-8429819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
17-172
               

               
Cow position:
               
chr20:9701683-9701527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
92, 25
               

               
Conread position:
               
17-180
               

               
Cow position:
               
chr20:27339959-27340112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
133, 25
               

               
Conread position:
               
17-181
               

               
Cow position:
               
chr20:6848515-6848681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
17-186
               

               
Cow position:
               
chr20:24391878-24392034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
125, 27
               

               
Conread position:
               
17-187
               

               
Cow position:
               
chr20:23936519-23936348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
115, 134
               

               
Conread position:
               
17-187
               

               
Cow position:
               
chr20:32068959-32068795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
121, 25
               

               
Conread position:
               
17-188
               

               
Cow position:
               
chr20:20312852-20312690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
17-189
               

               
Cow position:
               
chr20:9379303-9379464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
17-189
               

               
Cow position:
               
chr20:11923349-11923188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chr20:36010687-36010857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
123, 25
               

               
Conread position:
               
17-194
               

               
Cow position:
               
chr20:31077446-31077616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
131, 27
               

               
Conread position:
               
17-197
               

               
Cow position:
               
chr20:15761052-15760883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
17-200
               

               
Cow position:
               
chr20:14759766-14759596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
17-200
               

               
Cow position:
               
chr20:17904054-17904228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
17-200
               

               
Cow position:
               
chr20:19616380-19616561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
122, 25
               

               
Conread position:
               
17-200
               

               
Cow position:
               
chr20:28296185-28296363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
17-203
               

               
Cow position:
               
chr20:4892928-4892742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
110, 25
               

               
Conread position:
               
17-203
               

               
Cow position:
               
chr20:14433534-14433351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
113, 25
               

               
Conread position:
               
17-204
               

               
Cow position:
               
chr20:3599496-3599324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
133, 27
               

               
Conread position:
               
17-204
               

               
Cow position:
               
chr20:12996114-12995934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
115, 11
               

               
Conread position:
               
17-204
               

               
Cow position:
               
chr20:15569052-15568878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
17-204
               

               
Cow position:
               
chr20:30710752-30710564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 27
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr20:22704186-22704367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
118, 25
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr20:22959448-22959275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr20:38768562-38768386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
17-206
               

               
Cow position:
               
chr20:5636378-5636552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
17-206
               

               
Cow position:
               
chr20:6890610-6890787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
124, 25
               

               
Conread position:
               
17-206
               

               
Cow position:
               
chr20:11188911-11188728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
46, 107
               

               
Conread position:
               
17-206
               

               
Cow position:
               
chr20:33532202-33532376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
142, 22
               

               
Conread position:
               
17-206
               

               
Cow position:
               
chr20:34251789-34251600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
17-207
               

               
Cow position:
               
chr20:581027-580846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
17-207
               

               
Cow position:
               
chr20:6054624-6054435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
123, 21
               

               
Conread position:
               
17-207
               

               
Cow position:
               
chr20:10348640-10348825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
17-207
               

               
Cow position:
               
chr20:10884466-10884283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
17-207
               

               
Cow position:
               
chr20:13967366-13967182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
110, 25
               

               
Conread position:
               
17-207
               

               
Cow position:
               
chr20:17251603-17251791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
31, 107
               

               
Conread position:
               
17-207
               

               
Cow position:
               
chr20:21928798-21928979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
17-207
               

               
Cow position:
               
chr20:23064935-23064756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
17-207
               

               
Cow position:
               
chr20:28831862-28832048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
129, 25
               

               
Conread position:
               
17-207
               

               
Cow position:
               
chr20:28955808-28955627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
123, 27
               

               
Conread position:
               
17-207
               

               
Cow position:
               
chr20:35145907-35146095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
17-207
               

               
Cow position:
               
chr20:36040365-36040548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
17-207
               

               
Cow position:
               
chr20:36633711-36633891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
17-207
               

               
Cow position:
               
chr20:42469656-42469835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
125, 18
               

               
Conread position:
               
17-210
               

               
Cow position:
               
chr20:6602934-6603118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
129, 27
               

               
Conread position:
               
17-210
               

               
Cow position:
               
chr20:34221374-34221556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
17-213
               

               
Cow position:
               
chr20:9473724-9473534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
121, 42
               

               
Conread position:
               
17-214
               

               
Cow position:
               
chr20:4205861-4206053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
17-214
               

               
Cow position:
               
chr20:13876810-13876621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
136, 21
               

               
Conread position:
               
17-218
               

               
Cow position:
               
chr20:13025716-13025525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
118, 25
               

               
Conread position:
               
17-223
               

               
Cow position:
               
chr20:7442232-7442042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
17-223
               

               
Cow position:
               
chr20:9537028-9537226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
17-223
               

               
Cow position:
               
chr20:35797503-35797703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
17-223
               

               
Cow position:
               
chr20:38847341-38847144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
195, 26
               

               
Conread position:
               
18-187
               

               
Cow position:
               
chr20:4621450-4621284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
114, 26
               

               
Conread position:
               
18-197
               

               
Cow position:
               
chr20:3321246-3321068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
114, 26
               

               
Conread position:
               
18-204
               

               
Cow position:
               
chr20:34918167-34918344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
121, 14
               

               
Conread position:
               
18-207
               

               
Cow position:
               
chr20:18500107-18500281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
18-207
               

               
Cow position:
               
chr20:36779835-36779655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
18-212
               

               
Cow position:
               
chr20:34901464-34901651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
114, 24
               

               
Conread position:
               
19-207
               

               
Cow position:
               
chr20:24000903-24000723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
127, 22
               

               
Conread position:
               
20-180
               

               
Cow position:
               
chr20:3781529-3781374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
112, 20
               

               
Conread position:
               
20-200
               

               
Cow position:
               
chr20:12420721-12420549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
20-204
               

               
Cow position:
               
chr20:24711732-24711911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
115, 22
               

               
Conread position:
               
20-207
               

               
Cow position:
               
chr20:3331393-3331211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
128, 24
               

               
Conread position:
               
20-207
               

               
Cow position:
               
chr20:6240624-6240446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
127, 22
               

               
Conread position:
               
20-207
               

               
Cow position:
               
chr20:10200244-10200420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
20-207
               

               
Cow position:
               
chr20:21345311-21345507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 111
               

               
Conread position:
               
20-207
               

               
Cow position:
               
chr20:21714649-21714830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
42, 22
               

               
Conread position:
               
20-218
               

               
Cow position:
               
chr20:28067529-28067334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
20-221
               

               
Cow position:
               
chr20:22484757-22484951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
21-144
               

               
Cow position:
               
chr20:12334272-12334387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
21-197
               

               
Cow position:
               
chr20:18185467-18185633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
115, 23
               

               
Conread position:
               
21-200
               

               
Cow position:
               
chr20:13794887-13795052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
21-205
               

               
Cow position:
               
chr20:27003836-27003652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
111, 21
               

               
Conread position:
               
21-207
               

               
Cow position:
               
chr20:8098180-8098360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
131, 23
               

               
Conread position:
               
21-207
               

               
Cow position:
               
chr20:33435270-33435090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
21-207
               

               
Cow position:
               
chr20:35907154-35906981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
21-214
               

               
Cow position:
               
chr20:4945351-4945170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
21-223
               

               
Cow position:
               
chr20:38551268-38551462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
22-200
               

               
Cow position:
               
chr20:283026-282856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
22-200
               

               
Cow position:
               
chr20:39728347-39728519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
125, 20
               

               
Conread position:
               
22-206
               

               
Cow position:
               
chr20:5814473-5814640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
22-207
               

               
Cow position:
               
chr20:15565928-15565753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
127, 56
               

               
Conread position:
               
22-208
               

               
Cow position:
               
chr20:15235668-15235839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
174, 22
               

               
Conread position:
               
23-185
               

               
Cow position:
               
chr20:26469164-26469008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
118, 19
               

               
Conread position:
               
23-190
               

               
Cow position:
               
chr20:17733876-17733719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
156, 19
               

               
Conread position:
               
23-200
               

               
Cow position:
               
chr20:5104541-5104381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
23-204
               

               
Cow position:
               
chr20:14100536-14100360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
130, 22
               

               
Conread position:
               
23-206
               

               
Cow position:
               
chr20:33144655-33144480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 19
               

               
Conread position:
               
23-207
               

               
Cow position:
               
chr20:6096593-6096421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
23-207
               

               
Cow position:
               
chr20:19236978-19237149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
122, 19
               

               
Conread position:
               
23-207
               

               
Cow position:
               
chr20:40781866-40782035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
24-200
               

               
Cow position:
               
chr20:20983899-20984061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
24-206
               

               
Cow position:
               
chr20:11482234-11482061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
121, 18
               

               
Conread position:
               
27-197
               

               
Cow position:
               
chr20:17765431-17765264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
28-207
               

               
Cow position:
               
chr20:5950738-5950569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
121, 57
               

               
Conread position:
               
28-207
               

               
Cow position:
               
chr20:14572454-14572289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
28-207
               

               
Cow position:
               
chr20:23103125-23103297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
115, 14
               

               
Conread position:
               
28-210
               

               
Cow position:
               
chr20:12430890-12430719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 14
               

               
Conread position:
               
28-215
               

               
Cow position:
               
chr20:7659313-7659131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 14
               

               
Conread position:
               
29-207
               

               
Cow position:
               
chr20:34001493-34001315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
30-214
               

               
Cow position:
               
chr20:21698294-21698475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 12
               

               
Conread position:
               
32-187
               

               
Cow position:
               
chr20:37272621-37272771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
116, 10
               

               
Conread position:
               
33-204
               

               
Cow position:
               
chr20:28819026-28818854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
94, 57
               

               
Conread position:
               
34-204
               

               
Cow position:
               
chr20:30119666-30119500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
111, 16
               

               
Conread position:
               
38-207
               

               
Cow position:
               
chr20:39415655-39415824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
5, 16
               

               
Conread position:
               
42-207
               

               
Cow position:
               
chr20:15822468-15822624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
42-220
               

               
Cow position:
               
chr20:18392345-18392177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
160, 10
               

               
Conread position:
               
44-207
               

               
Cow position:
               
chr20:33819135-33819296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
66, 106
               

               
Conread position:
               
45-207
               

               
Cow position:
               
chr20:28594202-28594360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 8
               

               
Conread position:
               
47-207
               

               
Cow position:
               
chr20:14879704-14879863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
48-207
               

               
Cow position:
               
chr20:35192697-35192846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
50-207
               

               
Cow position:
               
chr20:11135835-11135687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
51-203
               

               
Cow position:
               
chr20:41403500-41403647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 10
               

               
Conread position:
               
51-207
               

               
Cow position:
               
chr20:11008091-11008244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
53-176
               

               
Cow position:
               
chr20:11498436-11498556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 65
               

               
Conread position:
               
53-200
               

               
Cow position:
               
chr20:11548798-11548653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
53-200
               

               
Cow position:
               
chr20:37357531-37357677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
93, 70
               

               
Conread position:
               
53-204
               

               
Cow position:
               
chr20:35009821-35009664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
53-207
               

               
Cow position:
               
chr20:5078124-5078274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
53-207
               

               
Cow position:
               
chr20:16715323-16715466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
53-213
               

               
Cow position:
               
chr20:29844975-29845131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
95, 43
               

               
Conread position:
               
53-223
               

               
Cow position:
               
chr20:12064850-12065013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
54-185
               

               
Cow position:
               
chr20:34084992-34085120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
54-206
               

               
Cow position:
               
chr20:34597175-34597024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 139
               

               
Conread position:
               
54-207
               

               
Cow position:
               
chr20:4334599-4334456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 59
               

               
Conread position:
               
54-207
               

               
Cow position:
               
chr20:16491997-16492147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 69
               

               
Conread position:
               
54-207
               

               
Cow position:
               
chr20:19751233-19751381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
89, 69
               

               
Conread position:
               
54-207
               

               
Cow position:
               
chr20:23541232-23541083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
47, 74
               

               
Conread position:
               
54-207
               

               
Cow position:
               
chr20:29805734-29805584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
73, 34
               

               
Conread position:
               
54-223
               

               
Cow position:
               
chr20:5078549-5078721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
78, 97
               

               
Conread position:
               
55-209
               

               
Cow position:
               
chr20:6423898-6424049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
90, 68
               

               
Conread position:
               
55-210
               

               
Cow position:
               
chr20:40511832-40511679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
80, 111
               

               
Conread position:
               
56-200
               

               
Cow position:
               
chr20:16548350-16548209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 73
               

               
Conread position:
               
56-207
               

               
Cow position:
               
chr20:14980586-14980435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 68
               

               
Conread position:
               
57-192
               

               
Cow position:
               
chr20:40726661-40726528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 61
               

               
Conread position:
               
57-205
               

               
Cow position:
               
chr20:21428094-21428234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 31
               

               
Conread position:
               
59-207
               

               
Cow position:
               
chr20:23506539-23506396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
92, 64
               

               
Conread position:
               
61-185
               

               
Cow position:
               
chr20:41973818-41973695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
88, 62
               

               
Conread position:
               
64-207
               

               
Cow position:
               
chr20:20056549-20056411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 59
               

               
Conread position:
               
75-207
               

               
Cow position:
               
chr20:10772150-10772280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
67, 48
               

               
Conread position:
               
353-542
               

               
Cow position:
               
chr20:5703516-5703704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
362-558
               

               
Cow position:
               
chr20:12126251-12126051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 24
               

               
Conread position:
               
365-515
               

               
Cow position:
               
chr20:15515384-15515225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
366-514
               

               
Cow position:
               
chr20:11822534-11822682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 90
               

               
Conread position:
               
375-542
               

               
Cow position:
               
chr20:34097888-34097716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 116
               

               
Conread position:
               
375-543
               

               
Cow position:
               
chr20:24711906-24712073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
91, 116
               

               
Conread position:
               
375-553
               

               
Cow position:
               
chr20:4755768-4755590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
171, 112
               

               
Conread position:
               
375-564
               

               
Cow position:
               
chr20:35310390-35310585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
26, 118
               

               
Conread position:
               
375-564
               

               
Cow position:
               
chr20:37919304-37919124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
376-538
               

               
Cow position:
               
chr20:33076757-33076593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
377-552
               

               
Cow position:
               
chr20:19746037-19746216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 111
               

               
Conread position:
               
377-564
               

               
Cow position:
               
chr20:5268775-5268584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
92, 28
               

               
Conread position:
               
377-568
               

               
Cow position:
               
chr20:21279452-21279638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
13, 93
               

               
Conread position:
               
383-483
               

               
Cow position:
               
chr20:9537205-9537305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
383-545
               

               
Cow position:
               
chr20:27315050-27315211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
7, 79
               

               
Conread position:
               
383-552
               

               
Cow position:
               
chr20:3599327-3599157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
54, 76
               

               
Conread position:
               
384-564
               

               
Cow position:
               
chr20:5814640-5814823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 163
               

               
Conread position:
               
386-539
               

               
Cow position:
               
chr20:7426121-7425969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
386-542
               

               
Cow position:
               
chr20:25162049-25161899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
386-552
               

               
Cow position:
               
chr20:12581878-12581711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
160, 74
               

               
Conread position:
               
386-562
               

               
Cow position:
               
chr20:14879865-14880035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
386-563
               

               
Cow position:
               
chr20:32847421-32847597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
161, 99
               

               
Conread position:
               
386-564
               

               
Cow position:
               
chr20:5702800-5702976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
112, 99
               

               
Conread position:
               
386-564
               

               
Cow position:
               
chr20:26387537-26387709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
386-593
               

               
Cow position:
               
chr20:25009556-25009352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 71
               

               
Conread position:
               
387-567
               

               
Cow position:
               
chr20:13876636-13876452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 106
               

               
Conread position:
               
388-537
               

               
Cow position:
               
chr20:16548200-16548045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
388-552
               

               
Cow position:
               
chr20:35605287-35605447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
156, 16
               

               
Conread position:
               
388-553
               

               
Cow position:
               
chr20:3035411-3035583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 106
               

               
Conread position:
               
388-565
               

               
Cow position:
               
chr20:12239605-12239435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
389-522
               

               
Cow position:
               
chr20:10245974-10245844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
389-522
               

               
Cow position:
               
chr20:17544703-17544839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 102
               

               
Conread position:
               
389-523
               

               
Cow position:
               
chr20:25474632-25474769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 57
               

               
Conread position:
               
389-529
               

               
Cow position:
               
chr20:18831799-18831661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
103, 96
               

               
Conread position:
               
389-533
               

               
Cow position:
               
chr20:39417824-39417679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 100
               

               
Conread position:
               
389-533
               

               
Cow position:
               
chr20:41089717-41089569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
389-536
               

               
Cow position:
               
chr20:22959268-22959118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
79, 32
               

               
Conread position:
               
389-537
               

               
Cow position:
               
chr20:354822-354671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
80, 100
               

               
Conread position:
               
389-538
               

               
Cow position:
               
chr20:3148763-3148909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
389-538
               

               
Cow position:
               
chr20:11499087-11499231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
389-538
               

               
Cow position:
               
chr20:25464966-25464818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
389-539
               

               
Cow position:
               
chr20:3141653-3141804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 101
               

               
Conread position:
               
389-539
               

               
Cow position:
               
chr20:27323345-27323498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
389-539
               

               
Cow position:
               
chr20:31845206-31845059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
389-539
               

               
Cow position:
               
chr20:34847985-34848132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
389-539
               

               
Cow position:
               
chr20:35741847-35742000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 102
               

               
Conread position:
               
389-541
               

               
Cow position:
               
chr20:20967400-20967550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
124, 96
               

               
Conread position:
               
389-541
               

               
Cow position:
               
chr20:29990368-29990213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
389-542
               

               
Cow position:
               
chr20:1824549-1824399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
389-542
               

               
Cow position:
               
chr20:5950564-5950408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 102
               

               
Conread position:
               
389-542
               

               
Cow position:
               
chr20:6054430-6054275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 102
               

               
Conread position:
               
389-542
               

               
Cow position:
               
chr20:6248522-6248367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 102
               

               
Conread position:
               
389-542
               

               
Cow position:
               
chr20:9034137-9033984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
389-542
               

               
Cow position:
               
chr20:11008249-11008405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
389-542
               

               
Cow position:
               
chr20:11359553-11359407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
389-542
               

               
Cow position:
               
chr20:11920651-11920501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
389-542
               

               
Cow position:
               
chr20:14282999-14283155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
389-542
               

               
Cow position:
               
chr20:19201610-19201766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 102
               

               
Conread position:
               
389-542
               

               
Cow position:
               
chr20:20459671-20459824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
389-542
               

               
Cow position:
               
chr20:22922997-22923146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
389-542
               

               
Cow position:
               
chr20:25021507-25021663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
389-542
               

               
Cow position:
               
chr20:30639704-30639546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
63, 57
               

               
Conread position:
               
389-542
               

               
Cow position:
               
chr20:37357935-37358091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 102
               

               
Conread position:
               
389-543
               

               
Cow position:
               
chr20:5365005-5365161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
96, 145
               

               
Conread position:
               
389-543
               

               
Cow position:
               
chr20:18763218-18763370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
389-543
               

               
Cow position:
               
chr20:38664171-38664326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
389-545
               

               
Cow position:
               
chr20:17251796-17251954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
389-551
               

               
Cow position:
               
chr20:1139688-1139524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
389-552
               

               
Cow position:
               
chr20:2316346-2316184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
116, 96
               

               
Conread position:
               
389-552
               

               
Cow position:
               
chr20:19919737-19919575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
389-552
               

               
Cow position:
               
chr20:21345512-21345680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
100, 160
               

               
Conread position:
               
389-552
               

               
Cow position:
               
chr20:28605288-28605451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
157, 96
               

               
Conread position:
               
389-552
               

               
Cow position:
               
chr20:34202714-34202885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 104
               

               
Conread position:
               
389-552
               

               
Cow position:
               
chr20:35442203-35442039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
389-553
               

               
Cow position:
               
chr20:7417088-7416917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
389-553
               

               
Cow position:
               
chr20:7738152-7737990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
157, 96
               

               
Conread position:
               
389-553
               

               
Cow position:
               
chr20:14490325-14490486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
155, 80
               

               
Conread position:
               
389-554
               

               
Cow position:
               
chr20:28935560-28935397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
389-556
               

               
Cow position:
               
chr20:33435076-33434913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 44
               

               
Conread position:
               
389-562
               

               
Cow position:
               
chr20:14620224-14620053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
389-566
               

               
Cow position:
               
chr20:25953343-25953523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
389-570
               

               
Cow position:
               
chr20:38872922-38872740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 156
               

               
Conread position:
               
389-573
               

               
Cow position:
               
chr20:20202298-20202485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
84, 100
               

               
Conread position:
               
389-575
               

               
Cow position:
               
chr20:16941209-16941018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
97, 183
               

               
Conread position:
               
390-537
               

               
Cow position:
               
chr20:14607831-14607686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
390-538
               

               
Cow position:
               
chr20:6848975-6849123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
77, 98
               

               
Conread position:
               
390-539
               

               
Cow position:
               
chr20:24657273-24657419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
390-569
               

               
Cow position:
               
chr20:26041018-26040833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
69, 99
               

               
Conread position:
               
391-523
               

               
Cow position:
               
chr20:2743056-2742921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 97
               

               
Conread position:
               
391-537
               

               
Cow position:
               
chr20:33067279-33067132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 98
               

               
Conread position:
               
391-539
               

               
Cow position:
               
chr20:14433340-14433191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
75, 98
               

               
Conread position:
               
391-552
               

               
Cow position:
               
chr20:8679582-8679417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 100
               

               
Conread position:
               
391-565
               

               
Cow position:
               
chr20:34221560-34221738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
81, 55
               

               
Conread position:
               
391-592
               

               
Cow position:
               
chr20:39016791-39016585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 100
               

               
Conread position:
               
392-552
               

               
Cow position:
               
chr20:28594367-28594536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 114
               

               
Conread position:
               
392-564
               

               
Cow position:
               
chr20:11548642-11548473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
154, 68
               

               
Conread position:
               
392-564
               

               
Cow position:
               
chr20:37609704-37609879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
392-565
               

               
Cow position:
               
chr20:21291742-21291923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
392-572
               

               
Cow position:
               
chr20:24883283-24883098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 101
               

               
Conread position:
               
392-574
               

               
Cow position:
               
chr20:297926-297738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 100
               

               
Conread position:
               
393-542
               

               
Cow position:
               
chr20:10200429-10200581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
76, 98
               

               
Conread position:
               
393-552
               

               
Cow position:
               
chr20:14755757-14755600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
151, 76
               

               
Conread position:
               
393-559
               

               
Cow position:
               
chr20:16291771-16291940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
395-539
               

               
Cow position:
               
chr20:13023417-13023273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
53, 93
               

               
Conread position:
               
396-564
               

               
Cow position:
               
chr20:21344553-21344725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
396-566
               

               
Cow position:
               
chr20:35146107-35146272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
147, 72
               

               
Conread position:
               
397-553
               

               
Cow position:
               
chr20:17606880-17606720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 94
               

               
Conread position:
               
398-563
               

               
Cow position:
               
chr20:11661235-11661075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
399-542
               

               
Cow position:
               
chr20:17733470-17733324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
399-542
               

               
Cow position:
               
chr20:23506024-23506169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 91
               

               
Conread position:
               
400-542
               

               
Cow position:
               
chr20:18500617-18500762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 91
               

               
Conread position:
               
400-566
               

               
Cow position:
               
chr20:32636240-32636075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
143, 85
               

               
Conread position:
               
403-539
               

               
Cow position:
               
chr20:4945161-4945021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 89
               

               
Conread position:
               
404-574
               

               
Cow position:
               
chr20:36741557-36741728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 85
               

               
Conread position:
               
406-564
               

               
Cow position:
               
chr20:26424502-26424663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
406-565
               

               
Cow position:
               
chr20:17524368-17524530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 85
               

               
Conread position:
               
407-552
               

               
Cow position:
               
chr20:42897880-42897731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 141
               

               
Conread position:
               
410-553
               

               
Cow position:
               
chr20:29754876-29755022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
59, 41
               
Show alignments to all cow chromosomes.