Non-Coding RNA Search

Cow genome map


           Conread name:
           LyN1-MLN01G030059
        

               Conread position:
               13-206
               

               Cow position:
               chr5:4617231-4617425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               13, 80
               

               Conread position:
               13-206
               

               Cow position:
               chr5:19523771-19523956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               13-207
               

               Cow position:
               chr5:37808803-37808606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               43, 95
               

               Conread position:
               14-210
               

               Cow position:
               chr5:50215682-50215501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               15-183
               

               Cow position:
               chr5:45036896-45037049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               15-198
               

               Cow position:
               chr5:26790581-26790407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               15-200
               

               Cow position:
               chr5:24485561-24485382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               130, 27
               

               Conread position:
               15-203
               

               Cow position:
               chr5:45409198-45409376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               135, 27
               

               Conread position:
               15-203
               

               Cow position:
               chr5:51053773-51053600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               15-204
               

               Cow position:
               chr5:58144729-58144545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               125, 25
               

               Conread position:
               15-207
               

               Cow position:
               chr5:6045166-6045353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               117, 23
               

               Conread position:
               15-207
               

               Cow position:
               chr5:14473543-14473347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               15-207
               

               Cow position:
               chr5:50722923-50723103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               15-221
               

               Cow position:
               chr5:7044832-7044630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               121, 27
               

               Conread position:
               15-235
               

               Cow position:
               chr5:1678267-1678477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               147, 29
               

               Conread position:
               17-177
               

               Cow position:
               chr5:47313350-47313503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-186
               

               Cow position:
               chr5:57327673-57327831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-187
               

               Cow position:
               chr5:8994689-8994526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               117, 25
               

               Conread position:
               17-187
               

               Cow position:
               chr5:16184964-16185127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               129, 25
               

               Conread position:
               17-187
               

               Cow position:
               chr5:20345036-20345201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               38, 76
               

               Conread position:
               17-187
               

               Cow position:
               chr5:23856289-23856121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               39, 23
               

               Conread position:
               17-187
               

               Cow position:
               chr5:29097236-29097407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               45, 133
               

               Conread position:
               17-187
               

               Cow position:
               chr5:51490882-51490725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               17-187
               

               Cow position:
               chr5:54064655-54064815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               127, 27
               

               Conread position:
               17-187
               

               Cow position:
               chr5:71579051-71579215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               122, 27
               

               Conread position:
               17-188
               

               Cow position:
               chr5:7921523-7921364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               17-188
               

               Cow position:
               chr5:47888834-47888671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               133, 25
               

               Conread position:
               17-194
               

               Cow position:
               chr5:47547841-47547676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-196
               

               Cow position:
               chr5:55756554-55756370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               17-197
               

               Cow position:
               chr5:33414536-33414359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               12, 26
               

               Conread position:
               17-197
               

               Cow position:
               chr5:57935232-57935059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-199
               

               Cow position:
               chr5:53855571-53855751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               133, 31
               

               Conread position:
               17-200
               

               Cow position:
               chr5:2500312-2500127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               17-200
               

               Cow position:
               chr5:4218752-4218918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               17-200
               

               Cow position:
               chr5:30629281-30629107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               17-200
               

               Cow position:
               chr5:40356990-40356794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               110, 25
               

               Conread position:
               17-200
               

               Cow position:
               chr5:54768033-54767857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               132, 25
               

               Conread position:
               17-201
               

               Cow position:
               chr5:64181698-64181522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               130, 25
               

               Conread position:
               17-202
               

               Cow position:
               chr5:8024318-8024139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               126, 25
               

               Conread position:
               17-204
               

               Cow position:
               chr5:5257415-5257234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               122, 16
               

               Conread position:
               17-204
               

               Cow position:
               chr5:12709762-12709943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               133, 36
               

               Conread position:
               17-204
               

               Cow position:
               chr5:34300793-34300973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               126, 27
               

               Conread position:
               17-204
               

               Cow position:
               chr5:60747399-60747222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               17-205
               

               Cow position:
               chr5:18574047-18574230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               39, 25
               

               Conread position:
               17-205
               

               Cow position:
               chr5:21964162-21964344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               124, 25
               

               Conread position:
               17-205
               

               Cow position:
               chr5:42744665-42744841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               124, 21
               

               Conread position:
               17-205
               

               Cow position:
               chr5:52165302-52165122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               130, 25
               

               Conread position:
               17-205
               

               Cow position:
               chr5:54311209-54311391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               128, 25
               

               Conread position:
               17-205
               

               Cow position:
               chr5:66972304-66972484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               126, 25
               

               Conread position:
               17-205
               

               Cow position:
               chr5:75437016-75436831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               126, 106
               

               Conread position:
               17-206
               

               Cow position:
               chr5:28926307-28926124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               17-206
               

               Cow position:
               chr5:28927712-28927529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               115, 27
               

               Conread position:
               17-206
               

               Cow position:
               chr5:67540326-67540145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               118, 25
               

               Conread position:
               17-207
               

               Cow position:
               chr5:458359-458546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               25, 52
               

               Conread position:
               17-207
               

               Cow position:
               chr5:3004607-3004783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               9, 26
               

               Conread position:
               17-207
               

               Cow position:
               chr5:6504003-6503824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               17-207
               

               Cow position:
               chr5:9090143-9089966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-207
               

               Cow position:
               chr5:11540171-11539993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-207
               

               Cow position:
               chr5:14550705-14550527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-207
               

               Cow position:
               chr5:26377790-26377611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               130, 25
               

               Conread position:
               17-207
               

               Cow position:
               chr5:28456530-28456348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               17-207
               

               Cow position:
               chr5:28459832-28459649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               17-207
               

               Cow position:
               chr5:29827926-29828104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-207
               

               Cow position:
               chr5:30950039-30949858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               129, 25
               

               Conread position:
               17-207
               

               Cow position:
               chr5:34506049-34505869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               121, 23
               

               Conread position:
               17-207
               

               Cow position:
               chr5:35247233-35247053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               118, 27
               

               Conread position:
               17-207
               

               Cow position:
               chr5:45273624-45273444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               17-207
               

               Cow position:
               chr5:47323331-47323519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               21, 111
               

               Conread position:
               17-207
               

               Cow position:
               chr5:48829035-48829211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-207
               

               Cow position:
               chr5:49474672-49474488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               17-207
               

               Cow position:
               chr5:51935063-51935247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               17-207
               

               Cow position:
               chr5:54405015-54404833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               126, 8
               

               Conread position:
               17-207
               

               Cow position:
               chr5:54713860-54713674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               133, 106
               

               Conread position:
               17-207
               

               Cow position:
               chr5:56680124-56680308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               110, 27
               

               Conread position:
               17-207
               

               Cow position:
               chr5:56820385-56820204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               132, 25
               

               Conread position:
               17-207
               

               Cow position:
               chr5:58855980-58856160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               124, 25
               

               Conread position:
               17-207
               

               Cow position:
               chr5:61576418-61576602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               93, 24
               

               Conread position:
               17-207
               

               Cow position:
               chr5:61840063-61840245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               126, 106
               

               Conread position:
               17-207
               

               Cow position:
               chr5:66581840-66582018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-209
               

               Cow position:
               chr5:55068587-55068765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               110, 25
               

               Conread position:
               17-209
               

               Cow position:
               chr5:64137128-64137315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               17-214
               

               Cow position:
               chr5:37646669-37646479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               80, 16
               

               Conread position:
               17-220
               

               Cow position:
               chr5:18289006-18289199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               128, 25
               

               Conread position:
               17-223
               

               Cow position:
               chr5:991343-991541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               185, 25
               

               Conread position:
               17-223
               

               Cow position:
               chr5:30844990-30845187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               115, 26
               

               Conread position:
               17-223
               

               Cow position:
               chr5:34528438-34528624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 28
               

               Conread position:
               17-230
               

               Cow position:
               chr5:19335910-19335697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               133, 27
               

               Conread position:
               18-153
               

               Cow position:
               chr5:35145227-35145351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               18-184
               

               Cow position:
               chr5:44583250-44583096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               18-200
               

               Cow position:
               chr5:42064076-42064257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 24
               

               Conread position:
               18-205
               

               Cow position:
               chr5:44848148-44847966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 49
               

               Conread position:
               18-206
               

               Cow position:
               chr5:4032116-4031933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               125, 24
               

               Conread position:
               18-207
               

               Cow position:
               chr5:14904199-14904011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               6, 40
               

               Conread position:
               18-207
               

               Cow position:
               chr5:25447439-25447621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               175, 24
               

               Conread position:
               18-207
               

               Cow position:
               chr5:31481024-31481205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               109, 24
               

               Conread position:
               18-207
               

               Cow position:
               chr5:31918529-31918700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               18-207
               

               Cow position:
               chr5:44796852-44796676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               134, 16
               

               Conread position:
               18-207
               

               Cow position:
               chr5:54350490-54350304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               40, 24
               

               Conread position:
               18-207
               

               Cow position:
               chr5:59057873-59057682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               109, 24
               

               Conread position:
               18-209
               

               Cow position:
               chr5:59115259-59115444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               50, 24
               

               Conread position:
               18-210
               

               Cow position:
               chr5:64758892-64758707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               135, 10
               

               Conread position:
               18-227
               

               Cow position:
               chr5:34115528-34115733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               109, 24
               

               Conread position:
               19-215
               

               Cow position:
               chr5:29212823-29213009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               126, 23
               

               Conread position:
               20-183
               

               Cow position:
               chr5:54060156-54060313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               127, 22
               

               Conread position:
               20-197
               

               Cow position:
               chr5:7140231-7140057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               20-201
               

               Cow position:
               chr5:56135089-56134912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               107, 22
               

               Conread position:
               20-202
               

               Cow position:
               chr5:44994158-44993986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               118, 22
               

               Conread position:
               20-202
               

               Cow position:
               chr5:64140410-64140591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               54, 22
               

               Conread position:
               20-206
               

               Cow position:
               chr5:43474727-43474902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               132, 22
               

               Conread position:
               20-207
               

               Cow position:
               chr5:2309680-2309499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 24
               

               Conread position:
               20-207
               

               Cow position:
               chr5:24348987-24349164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               119, 22
               

               Conread position:
               20-207
               

               Cow position:
               chr5:30178630-30178447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               125, 22
               

               Conread position:
               20-207
               

               Cow position:
               chr5:35235829-35235652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               20-207
               

               Cow position:
               chr5:47704250-47704069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               62, 22
               

               Conread position:
               20-207
               

               Cow position:
               chr5:63987571-63987388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               112, 70
               

               Conread position:
               20-210
               

               Cow position:
               chr5:3668781-3668958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               130, 24
               

               Conread position:
               20-210
               

               Cow position:
               chr5:32696940-32696762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               123, 20
               

               Conread position:
               20-215
               

               Cow position:
               chr5:50972410-50972598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               107, 24
               

               Conread position:
               20-224
               

               Cow position:
               chr5:21828746-21828946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               182, 22
               

               Conread position:
               21-141
               

               Cow position:
               chr5:57271387-57271274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               21-148
               

               Cow position:
               chr5:65933049-65932930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               21-183
               

               Cow position:
               chr5:47721419-47721579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               106, 23
               

               Conread position:
               21-189
               

               Cow position:
               chr5:16179644-16179482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               113, 21
               

               Conread position:
               21-202
               

               Cow position:
               chr5:72564641-72564818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               21-204
               

               Cow position:
               chr5:3771722-3771904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               26, 41
               

               Conread position:
               21-204
               

               Cow position:
               chr5:52000103-52000277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               126, 21
               

               Conread position:
               21-205
               

               Cow position:
               chr5:42845725-42845538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 105
               

               Conread position:
               21-205
               

               Cow position:
               chr5:43738072-43737908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               21-206
               

               Cow position:
               chr5:32975672-32975497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               120, 21
               

               Conread position:
               21-207
               

               Cow position:
               chr5:11427357-11427176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               121, 22
               

               Conread position:
               21-207
               

               Cow position:
               chr5:34049992-34050175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               21-207
               

               Cow position:
               chr5:36855085-36855263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               119, 23
               

               Conread position:
               21-207
               

               Cow position:
               chr5:47317090-47316917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               21-209
               

               Cow position:
               chr5:20127937-20128111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               21-210
               

               Cow position:
               chr5:39875004-39875184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               21-213
               

               Cow position:
               chr5:32956215-32956032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               112, 23
               

               Conread position:
               21-218
               

               Cow position:
               chr5:26990273-26990465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               113, 21
               

               Conread position:
               21-221
               

               Cow position:
               chr5:55176771-55176965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               109, 21
               

               Conread position:
               22-125
               

               Cow position:
               chr5:31469703-31469603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               22-187
               

               Cow position:
               chr5:44049580-44049741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               22-192
               

               Cow position:
               chr5:21944277-21944442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               22-197
               

               Cow position:
               chr5:63763342-63763515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               42, 8
               

               Conread position:
               22-200
               

               Cow position:
               chr5:71494699-71494873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               22-205
               

               Cow position:
               chr5:29980101-29979927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               111, 20
               

               Conread position:
               22-207
               

               Cow position:
               chr5:13691689-13691510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               22-207
               

               Cow position:
               chr5:16206273-16206099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               113, 20
               

               Conread position:
               22-207
               

               Cow position:
               chr5:16893890-16893714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               123, 20
               

               Conread position:
               22-207
               

               Cow position:
               chr5:28957731-28957557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               122, 20
               

               Conread position:
               22-207
               

               Cow position:
               chr5:39447648-39447478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               22-207
               

               Cow position:
               chr5:65601342-65601514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               22-207
               

               Cow position:
               chr5:65883894-65883715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               22-209
               

               Cow position:
               chr5:21920253-21920442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               41, 20
               

               Conread position:
               22-210
               

               Cow position:
               chr5:16508977-16509161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               105, 20
               

               Conread position:
               22-210
               

               Cow position:
               chr5:52645197-52645020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               23-200
               

               Cow position:
               chr5:3242593-3242425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               23-205
               

               Cow position:
               chr5:62142553-62142731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               83, 19
               

               Conread position:
               23-206
               

               Cow position:
               chr5:39258406-39258564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               23-206
               

               Cow position:
               chr5:66815692-66815515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               124, 27
               

               Conread position:
               23-207
               

               Cow position:
               chr5:23866280-23866114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               23-207
               

               Cow position:
               chr5:30487119-30487299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               119, 21
               

               Conread position:
               23-207
               

               Cow position:
               chr5:33560851-33560677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               23-209
               

               Cow position:
               chr5:53710811-53710630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               23-210
               

               Cow position:
               chr5:16214570-16214747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               113, 18
               

               Conread position:
               24-186
               

               Cow position:
               chr5:17644772-17644616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               122, 18
               

               Conread position:
               25-200
               

               Cow position:
               chr5:12901800-12901969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               102, 17
               

               Conread position:
               26-150
               

               Cow position:
               chr5:3492079-3492194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               26-206
               

               Cow position:
               chr5:27403353-27403173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               102, 16
               

               Conread position:
               26-209
               

               Cow position:
               chr5:64168356-64168177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               124, 16
               

               Conread position:
               28-201
               

               Cow position:
               chr5:57561405-57561576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               104, 14
               

               Conread position:
               28-204
               

               Cow position:
               chr5:13717683-13717515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               28-207
               

               Cow position:
               chr5:11668298-11668128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               81, 15
               

               Conread position:
               28-207
               

               Cow position:
               chr5:21040088-21039921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               28-207
               

               Cow position:
               chr5:58446691-58446864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               80, 16
               

               Conread position:
               28-213
               

               Cow position:
               chr5:40039882-40039703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               122, 14
               

               Conread position:
               28-220
               

               Cow position:
               chr5:3639604-3639417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               121, 94
               

               Conread position:
               29-207
               

               Cow position:
               chr5:38076594-38076426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               98, 13
               

               Conread position:
               30-184
               

               Cow position:
               chr5:42748046-42748187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               30-200
               

               Cow position:
               chr5:43371311-43371143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               5, 13
               

               Conread position:
               30-206
               

               Cow position:
               chr5:65887121-65886954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               129, 14
               

               Conread position:
               30-223
               

               Cow position:
               chr5:23678814-23678625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               115, 12
               

               Conread position:
               33-197
               

               Cow position:
               chr5:62985413-62985573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               14, 57
               

               Conread position:
               35-207
               

               Cow position:
               chr5:17063197-17063024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               92, 8
               

               Conread position:
               35-207
               

               Cow position:
               chr5:34192790-34192965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 55
               

               Conread position:
               36-183
               

               Cow position:
               chr5:76311260-76311405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               110, 6
               

               Conread position:
               36-207
               

               Cow position:
               chr5:73080096-73080261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               107, 7
               

               Conread position:
               38-207
               

               Cow position:
               chr5:57768089-57767928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               5, 16
               

               Conread position:
               40-207
               

               Cow position:
               chr5:34976949-34976785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               54, 20
               

               Conread position:
               41-207
               

               Cow position:
               chr5:55019190-55019349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               6, 22
               

               Conread position:
               42-188
               

               Cow position:
               chr5:56469927-56469782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               94, 19
               

               Conread position:
               42-197
               

               Cow position:
               chr5:60448114-60448265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               105, 11
               

               Conread position:
               42-200
               

               Cow position:
               chr5:56635799-56635947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               97, 11
               

               Conread position:
               42-203
               

               Cow position:
               chr5:73168103-73167958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               42-207
               

               Cow position:
               chr5:41293979-41294137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               104, 11
               

               Conread position:
               42-223
               

               Cow position:
               chr5:17999596-17999419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               101, 81
               

               Conread position:
               43-200
               

               Cow position:
               chr5:43992221-43992376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               100, 10
               

               Conread position:
               43-200
               

               Cow position:
               chr5:54086439-54086591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 81
               

               Conread position:
               43-205
               

               Cow position:
               chr5:59384793-59384634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               79, 108
               

               Conread position:
               52-207
               

               Cow position:
               chr5:50575691-50575841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               91, 72
               

               Conread position:
               53-207
               

               Cow position:
               chr5:5855775-5855915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               53-207
               

               Cow position:
               chr5:15479033-15479183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               90, 35
               

               Conread position:
               53-207
               

               Cow position:
               chr5:49685363-49685214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               97, 70
               

               Conread position:
               54-183
               

               Cow position:
               chr5:29860255-29860386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               54-207
               

               Cow position:
               chr5:23357243-23357390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               44, 70
               

               Conread position:
               54-207
               

               Cow position:
               chr5:41164994-41165145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               78, 93
               

               Conread position:
               55-200
               

               Cow position:
               chr5:72287004-72286863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               42, 69
               

               Conread position:
               55-205
               

               Cow position:
               chr5:51801063-51800917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               92, 68
               

               Conread position:
               55-223
               

               Cow position:
               chr5:55955816-55955985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               88, 68
               

               Conread position:
               55-229
               

               Cow position:
               chr5:26262763-26262594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               88, 10
               

               Conread position:
               56-176
               

               Cow position:
               chr5:23866766-23866652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               56-207
               

               Cow position:
               chr5:30805077-30805222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 64
               

               Conread position:
               64-207
               

               Cow position:
               chr5:46122432-46122296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               85, 56
               

               Conread position:
               67-210
               

               Cow position:
               chr5:30293651-30293509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               68, 78
               

               Conread position:
               69-220
               

               Cow position:
               chr5:19752228-19752379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 44
               

               Conread position:
               72-204
               

               Cow position:
               chr5:1766426-1766293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               12, 78
               

               Conread position:
               76-207
               

               Cow position:
               chr5:67212286-67212418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               56, 76
               

               Conread position:
               89-207
               

               Cow position:
               chr5:45420191-45420080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               90-207
               

               Cow position:
               chr5:55796017-55795910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               60, 17
               

               Conread position:
               313-552
               

               Cow position:
               chr5:19052808-19052564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               17, 72
               

               Conread position:
               350-552
               

               Cow position:
               chr5:49821453-49821660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               121, 12
               

               Conread position:
               364-537
               

               Cow position:
               chr5:70189110-70189289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               365-552
               

               Cow position:
               chr5:34787612-34787800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               179, 122
               

               Conread position:
               365-563
               

               Cow position:
               chr5:68537633-68537428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               17, 186
               

               Conread position:
               366-553
               

               Cow position:
               chr5:22957449-22957630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 97
               

               Conread position:
               372-538
               

               Cow position:
               chr5:55943671-55943506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               374-533
               

               Cow position:
               chr5:25597880-25598036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               374-538
               

               Cow position:
               chr5:38079415-38079586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               12, 79
               

               Conread position:
               374-542
               

               Cow position:
               chr5:4280496-4280660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               374-542
               

               Cow position:
               chr5:69383301-69383467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               17, 75
               

               Conread position:
               374-575
               

               Cow position:
               chr5:45405092-45405298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               8, 19
               

               Conread position:
               375-532
               

               Cow position:
               chr5:35247061-35246902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               98, 11
               

               Conread position:
               375-542
               

               Cow position:
               chr5:50101325-50101162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               375-548
               

               Cow position:
               chr5:64843922-64843743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               94, 11
               

               Conread position:
               375-555
               

               Cow position:
               chr5:34625008-34625178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               171, 78
               

               Conread position:
               375-563
               

               Cow position:
               chr5:57087014-57086824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 11
               

               Conread position:
               375-564
               

               Cow position:
               chr5:41165137-41165322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               171, 11
               

               Conread position:
               375-566
               

               Cow position:
               chr5:61580329-61580521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               73, 115
               

               Conread position:
               375-569
               

               Cow position:
               chr5:30247473-30247282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               375-569
               

               Cow position:
               chr5:65140345-65140544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               25, 11
               

               Conread position:
               376-518
               

               Cow position:
               chr5:23855620-23855481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               376-537
               

               Cow position:
               chr5:20128101-20128265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               85, 115
               

               Conread position:
               376-544
               

               Cow position:
               chr5:41884968-41885132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               376-553
               

               Cow position:
               chr5:20345586-20345768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               73, 48
               

               Conread position:
               377-539
               

               Cow position:
               chr5:19561399-19561233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               13, 115
               

               Conread position:
               377-552
               

               Cow position:
               chr5:57101473-57101301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               377-563
               

               Cow position:
               chr5:19968309-19968120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               115, 150
               

               Conread position:
               377-567
               

               Cow position:
               chr5:43106851-43107037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               91, 50
               

               Conread position:
               378-542
               

               Cow position:
               chr5:24109009-24108842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               8, 19
               

               Conread position:
               378-575
               

               Cow position:
               chr5:19811572-19811771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               16, 110
               

               Conread position:
               380-539
               

               Cow position:
               chr5:13270966-13270802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               5, 113
               

               Conread position:
               380-539
               

               Cow position:
               chr5:26790271-26790118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               380-539
               

               Cow position:
               chr5:52723626-52723788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               380-541
               

               Cow position:
               chr5:9487033-9486868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               19, 110
               

               Conread position:
               380-563
               

               Cow position:
               chr5:51125958-51125777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               5, 90
               

               Conread position:
               381-563
               

               Cow position:
               chr5:47220544-47220730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               65, 14
               

               Conread position:
               381-564
               

               Cow position:
               chr5:57447612-57447425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               382-563
               

               Cow position:
               chr5:40292884-40292701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               87, 109
               

               Conread position:
               383-539
               

               Cow position:
               chr5:19752358-19752514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               383-539
               

               Cow position:
               chr5:26262623-26262472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               383-542
               

               Cow position:
               chr5:67339939-67340097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               383-542
               

               Cow position:
               chr5:72903181-72903024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 103
               

               Conread position:
               383-552
               

               Cow position:
               chr5:55176942-55177109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               383-553
               

               Cow position:
               chr5:32394654-32394830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               384-538
               

               Cow position:
               chr5:75116516-75116358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               384-542
               

               Cow position:
               chr5:22667127-22667286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               7, 105
               

               Conread position:
               385-554
               

               Cow position:
               chr5:46479184-46479019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               385-575
               

               Cow position:
               chr5:5030501-5030688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               80, 19
               

               Conread position:
               386-529
               

               Cow position:
               chr5:64026960-64026812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               386-538
               

               Cow position:
               chr5:60207767-60207917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               386-539
               

               Cow position:
               chr5:37842220-37842066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               74, 103
               

               Conread position:
               386-539
               

               Cow position:
               chr5:65745706-65745555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               386-540
               

               Cow position:
               chr5:54312660-54312815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               386-542
               

               Cow position:
               chr5:44847962-44847811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               386-542
               

               Cow position:
               chr5:57497365-57497210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               386-552
               

               Cow position:
               chr5:3582619-3582782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               55, 70
               

               Conread position:
               386-552
               

               Cow position:
               chr5:29895230-29895399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               386-552
               

               Cow position:
               chr5:39035839-39036011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               83, 60
               

               Conread position:
               386-552
               

               Cow position:
               chr5:43858360-43858190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               83, 13
               

               Conread position:
               386-552
               

               Cow position:
               chr5:45845632-45845465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 62
               

               Conread position:
               386-552
               

               Cow position:
               chr5:47601871-47602035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               160, 101
               

               Conread position:
               386-552
               

               Cow position:
               chr5:51298656-51298490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               9, 103
               

               Conread position:
               386-552
               

               Cow position:
               chr5:52029466-52029630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               137, 28
               

               Conread position:
               386-552
               

               Cow position:
               chr5:65941191-65941022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               101, 65
               

               Conread position:
               386-552
               

               Cow position:
               chr5:66972488-66972657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               103, 124
               

               Conread position:
               386-553
               

               Cow position:
               chr5:11668126-11667956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               386-553
               

               Cow position:
               chr5:26549081-26548915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               160, 85
               

               Conread position:
               386-553
               

               Cow position:
               chr5:30561991-30562155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               386-553
               

               Cow position:
               chr5:34918405-34918570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               386-553
               

               Cow position:
               chr5:37253488-37253650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               61, 66
               

               Conread position:
               386-553
               

               Cow position:
               chr5:52137996-52138166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               83, 116
               

               Conread position:
               386-561
               

               Cow position:
               chr5:21721411-21721240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               386-562
               

               Cow position:
               chr5:16668756-16668926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               386-562
               

               Cow position:
               chr5:20288204-20288023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 163
               

               Conread position:
               386-563
               

               Cow position:
               chr5:56028482-56028308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               386-564
               

               Cow position:
               chr5:19079311-19079481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               160, 41
               

               Conread position:
               386-564
               

               Cow position:
               chr5:30276749-30276923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               135, 83
               

               Conread position:
               386-565
               

               Cow position:
               chr5:15991580-15991405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               170, 74
               

               Conread position:
               386-565
               

               Cow position:
               chr5:49207268-49207090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               386-567
               

               Cow position:
               chr5:35190169-35190348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               160, 99
               

               Conread position:
               386-571
               

               Cow position:
               chr5:20667714-20667527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               101, 74
               

               Conread position:
               386-583
               

               Cow position:
               chr5:30253800-30254001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               386-604
               

               Cow position:
               chr5:29828106-29828333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               80, 47
               

               Conread position:
               387-542
               

               Cow position:
               chr5:26149094-26149251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               72, 104
               

               Conread position:
               388-508
               

               Cow position:
               chr5:2851651-2851769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               388-515
               

               Cow position:
               chr5:65679912-65679784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               78, 101
               

               Conread position:
               388-531
               

               Cow position:
               chr5:50525586-50525725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               388-538
               

               Cow position:
               chr5:6695608-6695761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 46
               

               Conread position:
               388-538
               

               Cow position:
               chr5:12673417-12673268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               388-538
               

               Cow position:
               chr5:60523793-60523939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               388-539
               

               Cow position:
               chr5:34288192-34288041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               59, 100
               

               Conread position:
               388-539
               

               Cow position:
               chr5:54753190-54753036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               388-541
               

               Cow position:
               chr5:33834103-33834255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               80, 35
               

               Conread position:
               388-541
               

               Cow position:
               chr5:60016226-60016379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               83, 100
               

               Conread position:
               388-552
               

               Cow position:
               chr5:25035197-25035029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               54, 68
               

               Conread position:
               388-553
               

               Cow position:
               chr5:55955969-55956140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 75
               

               Conread position:
               388-560
               

               Cow position:
               chr5:60948191-60948367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 101
               

               Conread position:
               388-563
               

               Cow position:
               chr5:30845171-30845342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               59, 69
               

               Conread position:
               388-565
               

               Cow position:
               chr5:718211-718386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               73, 100
               

               Conread position:
               388-565
               

               Cow position:
               chr5:17104911-17105084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               388-566
               

               Cow position:
               chr5:28660292-28660470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               85, 15
               

               Conread position:
               388-566
               

               Cow position:
               chr5:33273754-33273935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               83, 161
               

               Conread position:
               388-566
               

               Cow position:
               chr5:54127351-54127527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               156, 84
               

               Conread position:
               388-566
               

               Cow position:
               chr5:65760474-65760291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 57
               

               Conread position:
               389-520
               

               Cow position:
               chr5:56327659-56327529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               17, 82
               

               Conread position:
               389-532
               

               Cow position:
               chr5:54750869-54751014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               80, 101
               

               Conread position:
               389-533
               

               Cow position:
               chr5:16939532-16939385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               389-533
               

               Cow position:
               chr5:48062055-48061903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               84, 62
               

               Conread position:
               389-535
               

               Cow position:
               chr5:36868799-36868947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               80, 33
               

               Conread position:
               389-536
               

               Cow position:
               chr5:64523801-64523654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               76, 99
               

               Conread position:
               389-537
               

               Cow position:
               chr5:42845531-42845386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               35, 100
               

               Conread position:
               389-538
               

               Cow position:
               chr5:11769331-11769484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               81, 103
               

               Conread position:
               389-538
               

               Cow position:
               chr5:26097351-26097502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               84, 72
               

               Conread position:
               389-538
               

               Cow position:
               chr5:38040502-38040356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               389-538
               

               Cow position:
               chr5:42064267-42064419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               389-538
               

               Cow position:
               chr5:56613502-56613351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 99
               

               Conread position:
               389-538
               

               Cow position:
               chr5:59662996-59662845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               389-539
               

               Cow position:
               chr5:58870-58717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               92, 21
               

               Conread position:
               389-539
               

               Cow position:
               chr5:7177213-7177365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               87, 101
               

               Conread position:
               389-539
               

               Cow position:
               chr5:12299973-12300123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               389-539
               

               Cow position:
               chr5:14904006-14903853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               74, 103
               

               Conread position:
               389-539
               

               Cow position:
               chr5:17987832-17987680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               80, 32
               

               Conread position:
               389-539
               

               Cow position:
               chr5:35208323-35208476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               389-539
               

               Cow position:
               chr5:57062467-57062315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               56, 74
               

               Conread position:
               389-539
               

               Cow position:
               chr5:57526862-57526714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               97, 30
               

               Conread position:
               389-539
               

               Cow position:
               chr5:63241039-63241192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               389-539
               

               Cow position:
               chr5:71445452-71445605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               389-540
               

               Cow position:
               chr5:7139771-7139627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               389-542
               

               Cow position:
               chr5:2309494-2309342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 61
               

               Conread position:
               389-542
               

               Cow position:
               chr5:14550522-14550366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               389-542
               

               Cow position:
               chr5:15364331-15364487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               77, 15
               

               Conread position:
               389-542
               

               Cow position:
               chr5:17999434-17999280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               389-542
               

               Cow position:
               chr5:40122548-40122392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               79, 102
               

               Conread position:
               389-542
               

               Cow position:
               chr5:43839937-43839781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               389-542
               

               Cow position:
               chr5:44796671-44796520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               389-542
               

               Cow position:
               chr5:55756356-55756197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               389-542
               

               Cow position:
               chr5:57755970-57755818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               389-542
               

               Cow position:
               chr5:61049394-61049550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               389-542
               

               Cow position:
               chr5:73424619-73424461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               69, 103
               

               Conread position:
               389-543
               

               Cow position:
               chr5:24915465-24915308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               87, 102
               

               Conread position:
               389-543
               

               Cow position:
               chr5:43611760-43611916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               84, 102
               

               Conread position:
               389-544
               

               Cow position:
               chr5:51233957-51233806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               389-545
               

               Cow position:
               chr5:51053587-51053429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               72, 101
               

               Conread position:
               389-551
               

               Cow position:
               chr5:53779217-53779380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               389-552
               

               Cow position:
               chr5:5016487-5016648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               143, 96
               

               Conread position:
               389-552
               

               Cow position:
               chr5:7057339-7057170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               77, 20
               

               Conread position:
               389-552
               

               Cow position:
               chr5:7676093-7675931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               158, 83
               

               Conread position:
               389-552
               

               Cow position:
               chr5:15770393-15770225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               389-552
               

               Cow position:
               chr5:29599484-29599325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               157, 80
               

               Conread position:
               389-552
               

               Cow position:
               chr5:36143046-36143203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               389-552
               

               Cow position:
               chr5:53055499-53055332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               389-552
               

               Cow position:
               chr5:65552649-65552493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               152, 27
               

               Conread position:
               389-553
               

               Cow position:
               chr5:61914626-61914799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               60, 107
               

               Conread position:
               389-553
               

               Cow position:
               chr5:67950724-67950557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               97, 80
               

               Conread position:
               389-558
               

               Cow position:
               chr5:34347672-34347500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               79, 16
               

               Conread position:
               389-563
               

               Cow position:
               chr5:35235627-35235448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               389-564
               

               Cow position:
               chr5:12901979-12902158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               389-564
               

               Cow position:
               chr5:45225751-45225582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               163, 10
               

               Conread position:
               389-564
               

               Cow position:
               chr5:52001561-52001380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               389-564
               

               Cow position:
               chr5:57767923-57767749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               389-565
               

               Cow position:
               chr5:16185440-16185618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               389-565
               

               Cow position:
               chr5:20843333-20843158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               30, 72
               

               Conread position:
               389-565
               

               Cow position:
               chr5:20995024-20994850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               84, 102
               

               Conread position:
               389-566
               

               Cow position:
               chr5:60514966-60514787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               70, 27
               

               Conread position:
               389-570
               

               Cow position:
               chr5:18289184-18289365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               155, 96
               

               Conread position:
               389-571
               

               Cow position:
               chr5:33560672-33560493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               158, 80
               

               Conread position:
               389-575
               

               Cow position:
               chr5:12668922-12668737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               157, 44
               

               Conread position:
               389-600
               

               Cow position:
               chr5:44810177-44809963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               80, 157
               

               Conread position:
               390-542
               

               Cow position:
               chr5:26894656-26894497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               390-542
               

               Cow position:
               chr5:72045614-72045461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               80, 101
               

               Conread position:
               390-558
               

               Cow position:
               chr5:63939998-63939826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 14
               

               Conread position:
               390-564
               

               Cow position:
               chr5:7012787-7012612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               95, 52
               

               Conread position:
               391-533
               

               Cow position:
               chr5:39937179-39937324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               391-533
               

               Cow position:
               chr5:44196865-44196723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               68, 97
               

               Conread position:
               391-537
               

               Cow position:
               chr5:3771910-3772053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               391-539
               

               Cow position:
               chr5:53980690-53980539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               78, 100
               

               Conread position:
               391-541
               

               Cow position:
               chr5:3743386-3743541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               391-541
               

               Cow position:
               chr5:62011747-62011902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               391-553
               

               Cow position:
               chr5:5855922-5856088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               76, 100
               

               Conread position:
               391-562
               

               Cow position:
               chr5:58519352-58519178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               96, 140
               

               Conread position:
               392-524
               

               Cow position:
               chr5:2469142-2469012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 27
               

               Conread position:
               392-538
               

               Cow position:
               chr5:20812611-20812761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               76, 29
               

               Conread position:
               392-539
               

               Cow position:
               chr5:48867399-48867257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               392-539
               

               Cow position:
               chr5:53946962-53947112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               392-539
               

               Cow position:
               chr5:56643132-56643281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               392-539
               

               Cow position:
               chr5:62996022-62996172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               89, 99
               

               Conread position:
               392-542
               

               Cow position:
               chr5:6245598-6245449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               392-553
               

               Cow position:
               chr5:50723111-50723276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               392-553
               

               Cow position:
               chr5:64060511-64060674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               76, 97
               

               Conread position:
               392-553
               

               Cow position:
               chr5:64140603-64140766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               76, 97
               

               Conread position:
               392-558
               

               Cow position:
               chr5:54713000-54712836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               77, 27
               

               Conread position:
               392-563
               

               Cow position:
               chr5:30492729-30492555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               75, 100
               

               Conread position:
               392-564
               

               Cow position:
               chr5:55949614-55949439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               77, 98
               

               Conread position:
               392-564
               

               Cow position:
               chr5:57399188-57399012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               77, 99
               

               Conread position:
               392-566
               

               Cow position:
               chr5:59335835-59336014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               71, 100
               

               Conread position:
               392-572
               

               Cow position:
               chr5:31648484-31648664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               152, 77
               

               Conread position:
               393-539
               

               Cow position:
               chr5:66659575-66659727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               393-542
               

               Cow position:
               chr5:44734659-44734511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               393-542
               

               Cow position:
               chr5:52853037-52853183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               393-542
               

               Cow position:
               chr5:55965828-55965676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               76, 98
               

               Conread position:
               393-564
               

               Cow position:
               chr5:17828413-17828238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               67, 98
               

               Conread position:
               393-572
               

               Cow position:
               chr5:56525646-56525462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               74, 98
               

               Conread position:
               393-575
               

               Cow position:
               chr5:30221712-30221528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               93, 68
               

               Conread position:
               395-564
               

               Cow position:
               chr5:55783895-55783723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               73, 96
               

               Conread position:
               395-566
               

               Cow position:
               chr5:43604207-43604380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               395-573
               

               Cow position:
               chr5:46710649-46710832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               80, 66
               

               Conread position:
               395-573
               

               Cow position:
               chr5:46715549-46715732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 66
               

               Conread position:
               396-566
               

               Cow position:
               chr5:37941738-37941566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               80, 93
               

               Conread position:
               397-552
               

               Cow position:
               chr5:20126979-20127136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               68, 91
               

               Conread position:
               399-562
               

               Cow position:
               chr5:12562683-12562523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               145, 44
               

               Conread position:
               400-553
               

               Cow position:
               chr5:25450027-25450172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               144, 61
               

               Conread position:
               401-564
               

               Cow position:
               chr5:58487449-58487612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               143, 86
               

               Conread position:
               404-542
               

               Cow position:
               chr5:56624440-56624298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               64, 88
               

               Conread position:
               404-542
               

               Cow position:
               chr5:71387284-71387415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               404-552
               

               Cow position:
               chr5:45854574-45854728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               57, 89
               

               Conread position:
               406-564
               

               Cow position:
               chr5:43815738-43815577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               407-552
               

               Cow position:
               chr5:14419930-14419790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               139, 50
               

               Conread position:
               407-552
               

               Cow position:
               chr5:56563834-56563975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               137, 60
               

               Conread position:
               411-536
               

               Cow position:
               chr5:44868441-44868565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               76, 0
               
Show alignments to all cow chromosomes.
Conread position:	13-206
Cow position:	chr5:4617231-4617425 (view UCSC Genome Browser custom track)
Alignm length:	199
Alignm identity:	142
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	13, 80
Conread position:	13-207
Cow position:	chr5:37808803-37808606 (view UCSC Genome Browser custom track)
Alignm length:	201
Alignm identity:	146
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	43, 95
Conread position:	14-210
Cow position:	chr5:50215682-50215501 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	144
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	30, 0
Conread position:	15-183
Cow position:	chr5:45036896-45037049 (view UCSC Genome Browser custom track)
Alignm length:	169
Alignm identity:	133
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	27, 0
Conread position:	15-198
Cow position:	chr5:26790581-26790407 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	140
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	27, 0
Conread position:	15-200
Cow position:	chr5:24485561-24485382 (view UCSC Genome Browser custom track)
Alignm length:	190
Alignm identity:	147
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	130, 27
Conread position:	15-203
Cow position:	chr5:45409198-45409376 (view UCSC Genome Browser custom track)
Alignm length:	190
Alignm identity:	138
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	135, 27
Conread position:	15-204
Cow position:	chr5:58144729-58144545 (view UCSC Genome Browser custom track)
Alignm length:	192
Alignm identity:	151
Alignm E-value:	1e-36
Alignm gaps (pig, cow):	125, 25
Conread position:	15-207
Cow position:	chr5:6045166-6045353 (view UCSC Genome Browser custom track)
Alignm length:	195
Alignm identity:	138
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	117, 23
Conread position:	15-221
Cow position:	chr5:7044832-7044630 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	147
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	121, 27
Conread position:	15-235
Cow position:	chr5:1678267-1678477 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	154
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	147, 29
Conread position:	17-177
Cow position:	chr5:47313350-47313503 (view UCSC Genome Browser custom track)
Alignm length:	161
Alignm identity:	119
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	25, 0
Conread position:	17-186
Cow position:	chr5:57327673-57327831 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	128
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	25, 0
Conread position:	17-187
Cow position:	chr5:8994689-8994526 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	135
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	117, 25
Conread position:	17-188
Cow position:	chr5:7921523-7921364 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	136
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	27, 0
Conread position:	17-194
Cow position:	chr5:47547841-47547676 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	135
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	25, 0
Conread position:	17-196
Cow position:	chr5:55756554-55756370 (view UCSC Genome Browser custom track)
Alignm length:	185
Alignm identity:	131
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	115, 0
Conread position:	17-197
Cow position:	chr5:33414536-33414359 (view UCSC Genome Browser custom track)
Alignm length:	183
Alignm identity:	137
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	12, 26
Conread position:	17-199
Cow position:	chr5:53855571-53855751 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	137
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	133, 31
Conread position:	17-200
Cow position:	chr5:2500312-2500127 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	137
Alignm E-value:	9e-25
Alignm gaps (pig, cow):	10, 26