Non-Coding RNA Search

Cow genome map


           Conread name:
           LyN1-MLN01G030059
        

               Conread position:
               10-180
               

               Cow position:
               chrX:37048705-37048548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               11-207
               

               Cow position:
               chrX:40320277-40320464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               14-198
               

               Cow position:
               chrX:4515550-4515736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               53, 34
               

               Conread position:
               14-207
               

               Cow position:
               chrX:17949615-17949435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               14-207
               

               Cow position:
               chrX:27946184-27945996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               124, 28
               

               Conread position:
               15-160
               

               Cow position:
               chrX:35284495-35284631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               15-197
               

               Cow position:
               chrX:31489386-31489570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               17, 108
               

               Conread position:
               15-198
               

               Cow position:
               chrX:47209220-47209395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               74, 11
               

               Conread position:
               15-207
               

               Cow position:
               chrX:25035508-25035324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               15-207
               

               Cow position:
               chrX:29289456-29289636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               121, 27
               

               Conread position:
               15-207
               

               Cow position:
               chrX:37489602-37489777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               15-207
               

               Cow position:
               chrX:45403954-45403767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               133, 29
               

               Conread position:
               15-212
               

               Cow position:
               chrX:48243585-48243400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               131, 27
               

               Conread position:
               16-207
               

               Cow position:
               chrX:26625794-26625613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 27
               

               Conread position:
               17-121
               

               Cow position:
               chrX:41764519-41764622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               17-129
               

               Cow position:
               chrX:25411718-25411825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               17-179
               

               Cow position:
               chrX:31252296-31252449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               130, 25
               

               Conread position:
               17-183
               

               Cow position:
               chrX:26285857-26286017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               125, 25
               

               Conread position:
               17-186
               

               Cow position:
               chrX:27174873-27175042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               93, 23
               

               Conread position:
               17-187
               

               Cow position:
               chrX:4091523-4091680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-187
               

               Cow position:
               chrX:36723213-36723049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               139, 26
               

               Conread position:
               17-188
               

               Cow position:
               chrX:43049226-43049384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-190
               

               Cow position:
               chrX:47379600-47379424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               31, 110
               

               Conread position:
               17-196
               

               Cow position:
               chrX:21672433-21672603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-196
               

               Cow position:
               chrX:32128105-32127942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               173, 25
               

               Conread position:
               17-197
               

               Cow position:
               chrX:27772083-27771915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-199
               

               Cow position:
               chrX:33466489-33466660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-200
               

               Cow position:
               chrX:8797129-8797309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 26
               

               Conread position:
               17-200
               

               Cow position:
               chrX:10412107-10411933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               137, 27
               

               Conread position:
               17-200
               

               Cow position:
               chrX:12309507-12309333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               17-200
               

               Cow position:
               chrX:42492637-42492470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-201
               

               Cow position:
               chrX:25238054-25238232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               119, 25
               

               Conread position:
               17-201
               

               Cow position:
               chrX:41743789-41743969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               120, 25
               

               Conread position:
               17-201
               

               Cow position:
               chrX:42874859-42875035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               152
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               129, 25
               

               Conread position:
               17-204
               

               Cow position:
               chrX:36355993-36356167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               127, 24
               

               Conread position:
               17-204
               

               Cow position:
               chrX:36778289-36778465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-205
               

               Cow position:
               chrX:15139667-15139489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-205
               

               Cow position:
               chrX:20340010-20339836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               131, 26
               

               Conread position:
               17-206
               

               Cow position:
               chrX:1176101-1175925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               133, 27
               

               Conread position:
               17-206
               

               Cow position:
               chrX:27228001-27228183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               17-206
               

               Cow position:
               chrX:34270279-34270461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               126, 27
               

               Conread position:
               17-206
               

               Cow position:
               chrX:37843598-37843776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               150, 25
               

               Conread position:
               17-206
               

               Cow position:
               chrX:47484390-47484207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               110, 25
               

               Conread position:
               17-207
               

               Cow position:
               chrX:1499543-1499723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               128, 25
               

               Conread position:
               17-207
               

               Cow position:
               chrX:3579822-3580002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               53, 25
               

               Conread position:
               17-207
               

               Cow position:
               chrX:4399007-4399184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               130, 25
               

               Conread position:
               17-207
               

               Cow position:
               chrX:5872195-5872375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               17-207
               

               Cow position:
               chrX:6278624-6278440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               129, 27
               

               Conread position:
               17-207
               

               Cow position:
               chrX:7351177-7351358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               135, 27
               

               Conread position:
               17-207
               

               Cow position:
               chrX:7695626-7695809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               104, 25
               

               Conread position:
               17-207
               

               Cow position:
               chrX:7710665-7710481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               128, 25
               

               Conread position:
               17-207
               

               Cow position:
               chrX:10831615-10831432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               115, 25
               

               Conread position:
               17-207
               

               Cow position:
               chrX:11085179-11085005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-207
               

               Cow position:
               chrX:11589710-11589530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               130, 25
               

               Conread position:
               17-207
               

               Cow position:
               chrX:11717906-11717725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               125, 25
               

               Conread position:
               17-207
               

               Cow position:
               chrX:12405509-12405323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               41, 25
               

               Conread position:
               17-207
               

               Cow position:
               chrX:13868571-13868760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               29, 109
               

               Conread position:
               17-207
               

               Cow position:
               chrX:15007272-15007091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               136, 25
               

               Conread position:
               17-207
               

               Cow position:
               chrX:17662715-17662537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-207
               

               Cow position:
               chrX:18204585-18204409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-207
               

               Cow position:
               chrX:21593165-21593345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               121, 25
               

               Conread position:
               17-207
               

               Cow position:
               chrX:27685125-27685306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               127, 25
               

               Conread position:
               17-207
               

               Cow position:
               chrX:27705459-27705644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               126, 105
               

               Conread position:
               17-207
               

               Cow position:
               chrX:29723619-29723798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               17-207
               

               Cow position:
               chrX:31442944-31442771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               117, 27
               

               Conread position:
               17-207
               

               Cow position:
               chrX:31729321-31729500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               129, 25
               

               Conread position:
               17-207
               

               Cow position:
               chrX:32820906-32821086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               132, 25
               

               Conread position:
               17-207
               

               Cow position:
               chrX:34441574-34441396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               126, 25
               

               Conread position:
               17-207
               

               Cow position:
               chrX:34502800-34502978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               17-207
               

               Cow position:
               chrX:38549330-38549505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-207
               

               Cow position:
               chrX:38728615-38728792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               17-207
               

               Cow position:
               chrX:40809564-40809751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               121, 25
               

               Conread position:
               17-207
               

               Cow position:
               chrX:46433364-46433549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               17-207
               

               Cow position:
               chrX:46532628-46532437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               110, 45
               

               Conread position:
               17-208
               

               Cow position:
               chrX:5017536-5017350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               115, 23
               

               Conread position:
               17-209
               

               Cow position:
               chrX:47481678-47481862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-210
               

               Cow position:
               chrX:917486-917307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-210
               

               Cow position:
               chrX:29680382-29680200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               128, 25
               

               Conread position:
               17-212
               

               Cow position:
               chrX:42994494-42994678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               128, 25
               

               Conread position:
               17-215
               

               Cow position:
               chrX:21566280-21566473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               65, 25
               

               Conread position:
               17-217
               

               Cow position:
               chrX:25232468-25232664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               65, 25
               

               Conread position:
               17-218
               

               Cow position:
               chrX:11614577-11614767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               17-218
               

               Cow position:
               chrX:44396897-44397083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               192, 25
               

               Conread position:
               17-219
               

               Cow position:
               chrX:36961517-36961711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 25
               

               Conread position:
               17-220
               

               Cow position:
               chrX:15147311-15147119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               193, 25
               

               Conread position:
               17-220
               

               Cow position:
               chrX:16055089-16055285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-220
               

               Cow position:
               chrX:19003178-19003371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               193, 25
               

               Conread position:
               17-220
               

               Cow position:
               chrX:38094645-38094442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               124, 25
               

               Conread position:
               17-223
               

               Cow position:
               chrX:14599411-14599611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               125, 25
               

               Conread position:
               17-223
               

               Cow position:
               chrX:22387365-22387172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               17-223
               

               Cow position:
               chrX:23514137-23513939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               132, 25
               

               Conread position:
               17-223
               

               Cow position:
               chrX:41879054-41878856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               82, 25
               

               Conread position:
               17-240
               

               Cow position:
               chrX:38439356-38439573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               118, 25
               

               Conread position:
               18-183
               

               Cow position:
               chrX:35969208-35969050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               86, 24
               

               Conread position:
               18-203
               

               Cow position:
               chrX:26440900-26440727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               18-206
               

               Cow position:
               chrX:37836467-37836643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               18-207
               

               Cow position:
               chrX:5638286-5638111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               128, 29
               

               Conread position:
               18-207
               

               Cow position:
               chrX:5679687-5679511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               132, 26
               

               Conread position:
               18-207
               

               Cow position:
               chrX:27446569-27446744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               30, 45
               

               Conread position:
               18-223
               

               Cow position:
               chrX:151780-151979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               6, 21
               

               Conread position:
               19-207
               

               Cow position:
               chrX:41992166-41991987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               127, 23
               

               Conread position:
               19-207
               

               Cow position:
               chrX:45993096-45993286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               45, 171
               

               Conread position:
               19-215
               

               Cow position:
               chrX:12018168-12018358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               129, 23
               

               Conread position:
               20-185
               

               Cow position:
               chrX:48385479-48385324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               20-187
               

               Cow position:
               chrX:29509563-29509398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               107, 22
               

               Conread position:
               20-192
               

               Cow position:
               chrX:43527384-43527553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               20-197
               

               Cow position:
               chrX:16416391-16416559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               123, 22
               

               Conread position:
               20-197
               

               Cow position:
               chrX:20752135-20752303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               125, 22
               

               Conread position:
               20-197
               

               Cow position:
               chrX:35681219-35681392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               125, 22
               

               Conread position:
               20-197
               

               Cow position:
               chrX:45875272-45875442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               20-206
               

               Cow position:
               chrX:9365794-9365619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               121, 22
               

               Conread position:
               20-206
               

               Cow position:
               chrX:11856309-11856487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               125, 22
               

               Conread position:
               20-207
               

               Cow position:
               chrX:6488457-6488637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               80, 24
               

               Conread position:
               20-207
               

               Cow position:
               chrX:11633559-11633740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               116, 22
               

               Conread position:
               20-207
               

               Cow position:
               chrX:15814968-15815142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               120, 24
               

               Conread position:
               20-207
               

               Cow position:
               chrX:38071884-38071708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               20-207
               

               Cow position:
               chrX:41027038-41027217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               132, 22
               

               Conread position:
               20-207
               

               Cow position:
               chrX:42171415-42171236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               127, 26
               

               Conread position:
               20-220
               

               Cow position:
               chrX:7721870-7722066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               112, 19
               

               Conread position:
               20-220
               

               Cow position:
               chrX:27516409-27516599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               20-220
               

               Cow position:
               chrX:42873273-42873460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               21-182
               

               Cow position:
               chrX:17908404-17908253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               124, 21
               

               Conread position:
               21-182
               

               Cow position:
               chrX:30832965-30832817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               21-194
               

               Cow position:
               chrX:17497967-17498132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               121, 21
               

               Conread position:
               21-197
               

               Cow position:
               chrX:8925583-8925749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               21-200
               

               Cow position:
               chrX:38963987-38964161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               66, 21
               

               Conread position:
               21-202
               

               Cow position:
               chrX:1616162-1615988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               121, 21
               

               Conread position:
               21-204
               

               Cow position:
               chrX:4768626-4768792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 23
               

               Conread position:
               21-204
               

               Cow position:
               chrX:42247303-42247125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               111, 21
               

               Conread position:
               21-205
               

               Cow position:
               chrX:34401880-34402058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               120, 21
               

               Conread position:
               21-206
               

               Cow position:
               chrX:4043970-4043807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               21-207
               

               Cow position:
               chrX:6234571-6234391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               113, 21
               

               Conread position:
               21-207
               

               Cow position:
               chrX:7718735-7718907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               21-207
               

               Cow position:
               chrX:9635299-9635132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               21-207
               

               Cow position:
               chrX:12249685-12249869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               117, 21
               

               Conread position:
               21-207
               

               Cow position:
               chrX:22921198-22921379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               56, 21
               

               Conread position:
               21-207
               

               Cow position:
               chrX:27394137-27393968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               21-207
               

               Cow position:
               chrX:27680281-27680456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               114, 12
               

               Conread position:
               21-207
               

               Cow position:
               chrX:29601948-29601770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               121, 21
               

               Conread position:
               21-207
               

               Cow position:
               chrX:34662968-34662788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               111, 23
               

               Conread position:
               21-207
               

               Cow position:
               chrX:41238485-41238296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               21-210
               

               Cow position:
               chrX:29120928-29121108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               120, 21
               

               Conread position:
               21-210
               

               Cow position:
               chrX:37910328-37910506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               113, 21
               

               Conread position:
               21-220
               

               Cow position:
               chrX:13382211-13382402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               121, 21
               

               Conread position:
               21-223
               

               Cow position:
               chrX:20151728-20151934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               41, 21
               

               Conread position:
               22-125
               

               Cow position:
               chrX:30922066-30922166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               22-195
               

               Cow position:
               chrX:26881685-26881517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               110, 20
               

               Conread position:
               22-197
               

               Cow position:
               chrX:39938637-39938473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               121, 20
               

               Conread position:
               22-197
               

               Cow position:
               chrX:46722854-46722684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               22-200
               

               Cow position:
               chrX:9855187-9855351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               22-200
               

               Cow position:
               chrX:9954028-9954192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               124, 20
               

               Conread position:
               22-200
               

               Cow position:
               chrX:39415484-39415317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               60, 20
               

               Conread position:
               22-203
               

               Cow position:
               chrX:23563910-23563737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               22-207
               

               Cow position:
               chrX:4296945-4296767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               26, 100
               

               Conread position:
               22-207
               

               Cow position:
               chrX:11082731-11082564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               122, 24
               

               Conread position:
               23-200
               

               Cow position:
               chrX:40826871-40826698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               104, 14
               

               Conread position:
               23-207
               

               Cow position:
               chrX:40035558-40035382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               104, 19
               

               Conread position:
               23-207
               

               Cow position:
               chrX:40480985-40480811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               23-207
               

               Cow position:
               chrX:41167081-41166904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               112, 19
               

               Conread position:
               23-207
               

               Cow position:
               chrX:46587701-46587880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               120, 16
               

               Conread position:
               25-206
               

               Cow position:
               chrX:47757043-47756870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               120, 17
               

               Conread position:
               25-207
               

               Cow position:
               chrX:4269181-4269006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               27-205
               

               Cow position:
               chrX:7277807-7277967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               27-207
               

               Cow position:
               chrX:4992128-4991955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               28-167
               

               Cow position:
               chrX:32747572-32747703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               109, 14
               

               Conread position:
               28-185
               

               Cow position:
               chrX:23497779-23497628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               110, 14
               

               Conread position:
               28-202
               

               Cow position:
               chrX:42461855-42461689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               115, 14
               

               Conread position:
               28-207
               

               Cow position:
               chrX:19188826-19188989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               28-207
               

               Cow position:
               chrX:28878280-28878116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               28-207
               

               Cow position:
               chrX:38654541-38654372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               121, 14
               

               Conread position:
               28-207
               

               Cow position:
               chrX:39558461-39558290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               121, 14
               

               Conread position:
               28-207
               

               Cow position:
               chrX:44054691-44054860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               27, 14
               

               Conread position:
               28-207
               

               Cow position:
               chrX:45113506-45113677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               124, 14
               

               Conread position:
               28-212
               

               Cow position:
               chrX:44961637-44961814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               122, 14
               

               Conread position:
               28-215
               

               Cow position:
               chrX:35413509-35413683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               74, 14
               

               Conread position:
               29-207
               

               Cow position:
               chrX:29549662-29549487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               114, 21
               

               Conread position:
               31-207
               

               Cow position:
               chrX:47657276-47657444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               111, 11
               

               Conread position:
               31-220
               

               Cow position:
               chrX:16348681-16348493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               101, 22
               

               Conread position:
               32-199
               

               Cow position:
               chrX:40567496-40567650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               35-203
               

               Cow position:
               chrX:29488108-29487954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               38-204
               

               Cow position:
               chrX:29194129-29194289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               42-204
               

               Cow position:
               chrX:28845730-28845888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               99, 11
               

               Conread position:
               42-205
               

               Cow position:
               chrX:6690357-6690204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               42-207
               

               Cow position:
               chrX:21327803-21327971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               42-207
               

               Cow position:
               chrX:24365927-24365763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               83, 18
               

               Conread position:
               42-207
               

               Cow position:
               chrX:29937987-29938149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               106, 40
               

               Conread position:
               42-207
               

               Cow position:
               chrX:30133422-30133260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               108, 11
               

               Conread position:
               42-210
               

               Cow position:
               chrX:20790821-20790974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               43-184
               

               Cow position:
               chrX:45412759-45412624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               45-209
               

               Cow position:
               chrX:44873658-44873498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               105, 8
               

               Conread position:
               45-214
               

               Cow position:
               chrX:42235625-42235459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               87, 7
               

               Conread position:
               45-218
               

               Cow position:
               chrX:40283028-40283194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               96, 14
               

               Conread position:
               47-206
               

               Cow position:
               chrX:28134248-28134397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               49, 13
               

               Conread position:
               53-188
               

               Cow position:
               chrX:25283106-25282972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               92, 70
               

               Conread position:
               53-199
               

               Cow position:
               chrX:42789529-42789672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               97, 70
               

               Conread position:
               53-202
               

               Cow position:
               chrX:5900377-5900522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               145, 70
               

               Conread position:
               53-205
               

               Cow position:
               chrX:31250295-31250444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               90, 70
               

               Conread position:
               53-207
               

               Cow position:
               chrX:12095865-12095714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               90, 70
               

               Conread position:
               53-207
               

               Cow position:
               chrX:20168466-20168616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               89, 70
               

               Conread position:
               53-210
               

               Cow position:
               chrX:48044605-48044453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               96, 69
               

               Conread position:
               54-187
               

               Cow position:
               chrX:12115955-12116087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               88, 69
               

               Conread position:
               54-189
               

               Cow position:
               chrX:35848471-35848606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               78, 38
               

               Conread position:
               54-189
               

               Cow position:
               chrX:37119503-37119638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               92, 68
               

               Conread position:
               54-207
               

               Cow position:
               chrX:161322-161470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               89, 65
               

               Conread position:
               54-207
               

               Cow position:
               chrX:1572228-1572081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               54-207
               

               Cow position:
               chrX:27261097-27261249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               89, 69
               

               Conread position:
               54-207
               

               Cow position:
               chrX:33000812-33000963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 69
               

               Conread position:
               54-207
               

               Cow position:
               chrX:41068630-41068783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               88, 67
               

               Conread position:
               54-207
               

               Cow position:
               chrX:43730309-43730166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               96, 53
               

               Conread position:
               54-207
               

               Cow position:
               chrX:43779937-43779789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               54-207
               

               Cow position:
               chrX:46072911-46072759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               88, 69
               

               Conread position:
               55-189
               

               Cow position:
               chrX:28835994-28835860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               81, 25
               

               Conread position:
               55-200
               

               Cow position:
               chrX:42855365-42855511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               72, 57
               

               Conread position:
               55-207
               

               Cow position:
               chrX:31515079-31515231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               90, 58
               

               Conread position:
               55-210
               

               Cow position:
               chrX:30543378-30543223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               92, 140
               

               Conread position:
               55-223
               

               Cow position:
               chrX:18695014-18694853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               92, 64
               

               Conread position:
               56-189
               

               Cow position:
               chrX:40647897-40648028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               84, 67
               

               Conread position:
               57-200
               

               Cow position:
               chrX:40680523-40680667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               86, 67
               

               Conread position:
               57-221
               

               Cow position:
               chrX:20882025-20881867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               88, 55
               

               Conread position:
               58-210
               

               Cow position:
               chrX:36514981-36514832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               86, 65
               

               Conread position:
               59-207
               

               Cow position:
               chrX:23562549-23562690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               86, 48
               

               Conread position:
               65-207
               

               Cow position:
               chrX:39220000-39220137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               79-207
               

               Cow position:
               chrX:15820531-15820653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               85-207
               

               Cow position:
               chrX:27511367-27511486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               60, 39
               

               Conread position:
               344-553
               

               Cow position:
               chrX:44225708-44225501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               105, 22
               

               Conread position:
               354-482
               

               Cow position:
               chrX:29327791-29327918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               364-523
               

               Cow position:
               chrX:34222755-34222912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               101, 22
               

               Conread position:
               364-542
               

               Cow position:
               chrX:31489559-31489739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               364-542
               

               Cow position:
               chrX:38967928-38968113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               104, 28
               

               Conread position:
               365-542
               

               Cow position:
               chrX:20151893-20152066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               17, 119
               

               Conread position:
               365-552
               

               Cow position:
               chrX:14135715-14135904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               27, 124
               

               Conread position:
               365-553
               

               Cow position:
               chrX:37867293-37867485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               365-564
               

               Cow position:
               chrX:1101594-1101792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               20, 95
               

               Conread position:
               365-564
               

               Cow position:
               chrX:47100558-47100353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               367-539
               

               Cow position:
               chrX:23335936-23335760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               12, 125
               

               Conread position:
               374-538
               

               Cow position:
               chrX:25815852-25815685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               98, 12
               

               Conread position:
               374-542
               

               Cow position:
               chrX:36866222-36866391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               94, 12
               

               Conread position:
               374-542
               

               Cow position:
               chrX:38301856-38302032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               375-538
               

               Cow position:
               chrX:8759675-8759837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               69, 37
               

               Conread position:
               375-539
               

               Cow position:
               chrX:10237863-10237698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               98, 11
               

               Conread position:
               375-542
               

               Cow position:
               chrX:37867481-37867651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               94, 116
               

               Conread position:
               375-552
               

               Cow position:
               chrX:42492473-42492292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               92, 11
               

               Conread position:
               375-570
               

               Cow position:
               chrX:42855508-42855708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               94, 11
               

               Conread position:
               376-538
               

               Cow position:
               chrX:34270609-34270775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               9, 123
               

               Conread position:
               376-539
               

               Cow position:
               chrX:27228176-27228344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               66, 117
               

               Conread position:
               376-539
               

               Cow position:
               chrX:31729492-31729652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               376-539
               

               Cow position:
               chrX:31986524-31986357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               33, 116
               

               Conread position:
               376-542
               

               Cow position:
               chrX:6640477-6640642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               84, 66
               

               Conread position:
               376-552
               

               Cow position:
               chrX:13121988-13122173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 120
               

               Conread position:
               376-552
               

               Cow position:
               chrX:16323968-16323785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               376-552
               

               Cow position:
               chrX:25037037-25037219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               94, 174
               

               Conread position:
               376-613
               

               Cow position:
               chrX:6634394-6634637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               378-542
               

               Cow position:
               chrX:51850-51684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               12, 112
               

               Conread position:
               380-538
               

               Cow position:
               chrX:22074856-22075009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               67, 15
               

               Conread position:
               380-539
               

               Cow position:
               chrX:11589313-11589152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               380-543
               

               Cow position:
               chrX:17498374-17498542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               5, 113
               

               Conread position:
               380-559
               

               Cow position:
               chrX:22552927-22552746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               7, 147
               

               Conread position:
               383-553
               

               Cow position:
               chrX:39642565-39642400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               383-564
               

               Cow position:
               chrX:37955906-37956087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               86, 12
               

               Conread position:
               385-542
               

               Cow position:
               chrX:34314083-34314239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               102, 74
               

               Conread position:
               385-566
               

               Cow position:
               chrX:26720622-26720449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               159, 9
               

               Conread position:
               386-483
               

               Cow position:
               chrX:20743664-20743762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               386-536
               

               Cow position:
               chrX:34565346-34565497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               85, 18
               

               Conread position:
               386-539
               

               Cow position:
               chrX:1122487-1122332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               88, 146
               

               Conread position:
               386-539
               

               Cow position:
               chrX:4559793-4559949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               61, 71
               

               Conread position:
               386-539
               

               Cow position:
               chrX:8731153-8731309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               83, 105
               

               Conread position:
               386-539
               

               Cow position:
               chrX:31436534-31436684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               386-541
               

               Cow position:
               chrX:34837004-34836855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               386-542
               

               Cow position:
               chrX:2936017-2936171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               386-542
               

               Cow position:
               chrX:8869342-8869186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               54, 102
               

               Conread position:
               386-542
               

               Cow position:
               chrX:23497631-23497479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               386-542
               

               Cow position:
               chrX:32910164-32910315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               386-552
               

               Cow position:
               chrX:11656141-11656307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               160, 101
               

               Conread position:
               386-552
               

               Cow position:
               chrX:37072449-37072616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               158, 99
               

               Conread position:
               386-552
               

               Cow position:
               chrX:38094460-38094297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               161, 77
               

               Conread position:
               386-552
               

               Cow position:
               chrX:38218774-38218943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               46, 104
               

               Conread position:
               386-553
               

               Cow position:
               chrX:13177416-13177254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               160, 82
               

               Conread position:
               386-553
               

               Cow position:
               chrX:16984701-16984864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               386-556
               

               Cow position:
               chrX:40685268-40685093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               386-557
               

               Cow position:
               chrX:29601768-29601593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               386-558
               

               Cow position:
               chrX:38549507-38549682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               61, 66
               

               Conread position:
               386-563
               

               Cow position:
               chrX:10278930-10279115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               78, 145
               

               Conread position:
               386-564
               

               Cow position:
               chrX:39290419-39290595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               129, 69
               

               Conread position:
               386-564
               

               Cow position:
               chrX:41453362-41453540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               160, 105
               

               Conread position:
               386-567
               

               Cow position:
               chrX:20957298-20957484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               386-568
               

               Cow position:
               chrX:27668898-27668719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               386-570
               

               Cow position:
               chrX:40336970-40337158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               386-571
               

               Cow position:
               chrX:19394613-19394802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               62, 106
               

               Conread position:
               388-520
               

               Cow position:
               chrX:4169969-4169838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               125, 63
               

               Conread position:
               388-541
               

               Cow position:
               chrX:5679869-5679713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               388-542
               

               Cow position:
               chrX:40556397-40556245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 82
               

               Conread position:
               388-545
               

               Cow position:
               chrX:11529405-11529559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               388-552
               

               Cow position:
               chrX:41215384-41215552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 103
               

               Conread position:
               388-561
               

               Cow position:
               chrX:26493068-26493243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               101, 158
               

               Conread position:
               388-563
               

               Cow position:
               chrX:23359052-23358877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               158, 99
               

               Conread position:
               388-564
               

               Cow position:
               chrX:16836227-16836054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               388-564
               

               Cow position:
               chrX:41941685-41941864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               80, 103
               

               Conread position:
               388-568
               

               Cow position:
               chrX:27261254-27261436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               81, 101
               

               Conread position:
               389-483
               

               Cow position:
               chrX:29680198-29680105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               389-515
               

               Cow position:
               chrX:40543458-40543337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               389-527
               

               Cow position:
               chrX:19717583-19717717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               389-532
               

               Cow position:
               chrX:20345513-20345659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               389-533
               

               Cow position:
               chrX:13868765-13868913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               389-533
               

               Cow position:
               chrX:31294509-31294360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               389-533
               

               Cow position:
               chrX:46068696-46068554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               389-537
               

               Cow position:
               chrX:47379058-47378917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               389-538
               

               Cow position:
               chrX:4109247-4109399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               389-538
               

               Cow position:
               chrX:15545945-15546095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               84, 129
               

               Conread position:
               389-538
               

               Cow position:
               chrX:32877312-32877165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               72, 100
               

               Conread position:
               389-538
               

               Cow position:
               chrX:34543847-34544000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               389-538
               

               Cow position:
               chrX:42461555-42461413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               389-538
               

               Cow position:
               chrX:46532432-46532276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               389-539
               

               Cow position:
               chrX:2314556-2314403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               389-539
               

               Cow position:
               chrX:3806745-3806893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               82, 97
               

               Conread position:
               389-539
               

               Cow position:
               chrX:4645850-4645699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               79, 101
               

               Conread position:
               389-539
               

               Cow position:
               chrX:17524321-17524168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               389-539
               

               Cow position:
               chrX:20339829-20339680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               80, 32
               

               Conread position:
               389-539
               

               Cow position:
               chrX:21327976-21328129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               84, 102
               

               Conread position:
               389-539
               

               Cow position:
               chrX:32420275-32420426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               79, 100
               

               Conread position:
               389-539
               

               Cow position:
               chrX:34420797-34420951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               389-539
               

               Cow position:
               chrX:38208482-38208339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               389-539
               

               Cow position:
               chrX:41810105-41809960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               389-539
               

               Cow position:
               chrX:42432445-42432299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               389-539
               

               Cow position:
               chrX:42927761-42927615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               389-539
               

               Cow position:
               chrX:46587885-46588035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               80, 100
               

               Conread position:
               389-539
               

               Cow position:
               chrX:48822279-48822127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               84, 100
               

               Conread position:
               389-541
               

               Cow position:
               chrX:27705649-27705804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               84, 122
               

               Conread position:
               389-541
               

               Cow position:
               chrX:34238782-34238940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               48, 105
               

               Conread position:
               389-542
               

               Cow position:
               chrX:1960362-1960207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               389-542
               

               Cow position:
               chrX:10516316-10516472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               80, 100
               

               Conread position:
               389-542
               

               Cow position:
               chrX:11653833-11653985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               389-542
               

               Cow position:
               chrX:12290782-12290936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               389-542
               

               Cow position:
               chrX:16556154-16556005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               389-542
               

               Cow position:
               chrX:20887578-20887431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 97
               

               Conread position:
               389-542
               

               Cow position:
               chrX:24170666-24170507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 33
               

               Conread position:
               389-542
               

               Cow position:
               chrX:26882017-26881861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               389-542
               

               Cow position:
               chrX:27074988-27074833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               389-542
               

               Cow position:
               chrX:27175061-27175218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               389-542
               

               Cow position:
               chrX:27202633-27202787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               389-542
               

               Cow position:
               chrX:27415517-27415370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               389-542
               

               Cow position:
               chrX:28067913-28068069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               389-542
               

               Cow position:
               chrX:30962814-30962657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               60, 103
               

               Conread position:
               389-542
               

               Cow position:
               chrX:35268924-35269074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               112, 96
               

               Conread position:
               389-542
               

               Cow position:
               chrX:35276048-35276204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               77, 102
               

               Conread position:
               389-542
               

               Cow position:
               chrX:35409815-35409970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               72, 38
               

               Conread position:
               389-542
               

               Cow position:
               chrX:35681630-35681785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               79, 101
               

               Conread position:
               389-542
               

               Cow position:
               chrX:37752043-37751893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               389-542
               

               Cow position:
               chrX:38964171-38964315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               389-542
               

               Cow position:
               chrX:40680677-40680833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               84, 102
               

               Conread position:
               389-542
               

               Cow position:
               chrX:41027222-41027378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               389-542
               

               Cow position:
               chrX:41858819-41858666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 99
               

               Conread position:
               389-542
               

               Cow position:
               chrX:42247119-42246963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               389-542
               

               Cow position:
               chrX:42449951-42449795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               389-542
               

               Cow position:
               chrX:43008672-43008828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               389-542
               

               Cow position:
               chrX:46533242-46533086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               389-542
               

               Cow position:
               chrX:46909878-46910026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               389-545
               

               Cow position:
               chrX:29050310-29050463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               58, 97
               

               Conread position:
               389-545
               

               Cow position:
               chrX:33654781-33654622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               389-546
               

               Cow position:
               chrX:44995561-44995722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               389-552
               

               Cow position:
               chrX:17956754-17956919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               98, 15
               

               Conread position:
               389-552
               

               Cow position:
               chrX:23471803-23471639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               58, 97
               

               Conread position:
               389-552
               

               Cow position:
               chrX:42760315-42760483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               79, 102
               

               Conread position:
               389-552
               

               Cow position:
               chrX:43150494-43150660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               80, 66
               

               Conread position:
               389-553
               

               Cow position:
               chrX:597411-597248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               80, 27
               

               Conread position:
               389-553
               

               Cow position:
               chrX:4269001-4268840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               154, 71
               

               Conread position:
               389-553
               

               Cow position:
               chrX:6407607-6407771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               80, 13
               

               Conread position:
               389-553
               

               Cow position:
               chrX:6480533-6480364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               389-553
               

               Cow position:
               chrX:11602420-11602259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 13
               

               Conread position:
               389-553
               

               Cow position:
               chrX:19018768-19018598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               389-553
               

               Cow position:
               chrX:27446749-27446912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               389-553
               

               Cow position:
               chrX:29451488-29451315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 107
               

               Conread position:
               389-553
               

               Cow position:
               chrX:41790366-41790197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               389-553
               

               Cow position:
               chrX:44040239-44040407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               389-554
               

               Cow position:
               chrX:35885664-35885501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               155, 96
               

               Conread position:
               389-557
               

               Cow position:
               chrX:36283403-36283574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               80, 53
               

               Conread position:
               389-561
               

               Cow position:
               chrX:42836244-42836416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               82, 101
               

               Conread position:
               389-563
               

               Cow position:
               chrX:15100046-15100221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               60, 97
               

               Conread position:
               389-563
               

               Cow position:
               chrX:16762834-16763007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 76
               

               Conread position:
               389-563
               

               Cow position:
               chrX:48558809-48558986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               97, 120
               

               Conread position:
               389-564
               

               Cow position:
               chrX:4091987-4092161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               80, 138
               

               Conread position:
               389-564
               

               Cow position:
               chrX:4328120-4327941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               78, 101
               

               Conread position:
               389-564
               

               Cow position:
               chrX:6389144-6389319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               98, 27
               

               Conread position:
               389-564
               

               Cow position:
               chrX:11633745-11633926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               389-564
               

               Cow position:
               chrX:12095709-12095529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               389-564
               

               Cow position:
               chrX:41010961-41011131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               154, 71
               

               Conread position:
               389-564
               

               Cow position:
               chrX:42875275-42875452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               155, 98
               

               Conread position:
               389-564
               

               Cow position:
               chrX:42893989-42894162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               86, 96
               

               Conread position:
               389-565
               

               Cow position:
               chrX:4632794-4632611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               52, 104
               

               Conread position:
               389-566
               

               Cow position:
               chrX:1938077-1938254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               80, 100
               

               Conread position:
               389-566
               

               Cow position:
               chrX:14925335-14925517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               389-566
               

               Cow position:
               chrX:16763862-16763689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               389-566
               

               Cow position:
               chrX:26205385-26205215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               151, 81
               

               Conread position:
               389-566
               

               Cow position:
               chrX:27270438-27270610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 99
               

               Conread position:
               389-566
               

               Cow position:
               chrX:41199287-41199462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 99
               

               Conread position:
               389-568
               

               Cow position:
               chrX:16801200-16801022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               80, 31
               

               Conread position:
               389-568
               

               Cow position:
               chrX:20583729-20583903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               389-571
               

               Cow position:
               chrX:8642109-8642291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               79, 26
               

               Conread position:
               389-571
               

               Cow position:
               chrX:24331839-24332026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               389-574
               

               Cow position:
               chrX:13923927-13924111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               124, 98
               

               Conread position:
               389-589
               

               Cow position:
               chrX:31250451-31250659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               390-515
               

               Cow position:
               chrX:45968212-45968337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               95, 78
               

               Conread position:
               390-542
               

               Cow position:
               chrX:3494981-3494832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               390-542
               

               Cow position:
               chrX:44339261-44339103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               79, 142
               

               Conread position:
               390-572
               

               Cow position:
               chrX:9451409-9451588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               97, 45
               

               Conread position:
               391-518
               

               Cow position:
               chrX:39180168-39180039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               94, 38
               

               Conread position:
               391-538
               

               Cow position:
               chrX:17231800-17231951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 101
               

               Conread position:
               391-539
               

               Cow position:
               chrX:46793681-46793535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               391-542
               

               Cow position:
               chrX:19761819-19761967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               391-542
               

               Cow position:
               chrX:44123320-44123467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               391-566
               

               Cow position:
               chrX:35285238-35285415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               78, 155
               

               Conread position:
               392-538
               

               Cow position:
               chrX:41166759-41166615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               392-539
               

               Cow position:
               chrX:48574291-48574139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               392-553
               

               Cow position:
               chrX:25035316-25035152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               392-558
               

               Cow position:
               chrX:28850789-28850951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               392-564
               

               Cow position:
               chrX:33466690-33466861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               76, 98
               

               Conread position:
               392-565
               

               Cow position:
               chrX:37749918-37749751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               392-566
               

               Cow position:
               chrX:41435483-41435303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               69, 160
               

               Conread position:
               392-580
               

               Cow position:
               chrX:35392232-35392046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               146, 77
               

               Conread position:
               393-539
               

               Cow position:
               chrX:34441387-34441238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               76, 98
               

               Conread position:
               393-542
               

               Cow position:
               chrX:36367868-36367716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               393-552
               

               Cow position:
               chrX:4403384-4403547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               393-552
               

               Cow position:
               chrX:5097732-5097564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 103
               

               Conread position:
               393-552
               

               Cow position:
               chrX:9252096-9251934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               47, 97
               

               Conread position:
               393-562
               

               Cow position:
               chrX:27416160-27416335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               73, 11
               

               Conread position:
               393-564
               

               Cow position:
               chrX:25207788-25207620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               151, 28
               

               Conread position:
               394-539
               

               Cow position:
               chrX:29478792-29478937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               79, 7
               

               Conread position:
               395-564
               

               Cow position:
               chrX:28106916-28107087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               71, 94
               

               Conread position:
               396-539
               

               Cow position:
               chrX:39094252-39094118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               396-542
               

               Cow position:
               chrX:33678403-33678252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               396-553
               

               Cow position:
               chrX:9425683-9425532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               148, 74
               

               Conread position:
               397-539
               

               Cow position:
               chrX:35509608-35509465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               79, 92
               

               Conread position:
               403-572
               

               Cow position:
               chrX:17929078-17929246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               140, 84
               

               Conread position:
               403-579
               

               Cow position:
               chrX:37717799-37717976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               66, 13
               

               Conread position:
               405-541
               

               Cow position:
               chrX:30824068-30824202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               405-542
               

               Cow position:
               chrX:31279845-31279709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               407-564
               

               Cow position:
               chrX:37844076-37844239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               42, 156
               

               Conread position:
               408-542
               

               Cow position:
               chrX:43028314-43028447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               411-542
               

               Cow position:
               chrX:19356548-19356682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               58, 80
               

               Conread position:
               412-552
               

               Cow position:
               chrX:1996366-1996222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 79
               

               Conread position:
               414-569
               

               Cow position:
               chrX:4399207-4399363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               28, 42
               

               Conread position:
               421-542
               

               Cow position:
               chrX:10479844-10479968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 70
               

               Conread position:
               422-585
               

               Cow position:
               chrX:42159037-42159200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 122
               
Show alignments to all cow chromosomes.
Conread position:	10-180
Cow position:	chrX:37048705-37048548 (view UCSC Genome Browser custom track)
Alignm length:	171
Alignm identity:	130
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	32, 0
Conread position:	11-207
Cow position:	chrX:40320277-40320464 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	142
Alignm E-value:	6e-25
Alignm gaps (pig, cow):	31, 0
Conread position:	14-198
Cow position:	chrX:4515550-4515736 (view UCSC Genome Browser custom track)
Alignm length:	191
Alignm identity:	140
Alignm E-value:	6e-25
Alignm gaps (pig, cow):	53, 34
Conread position:	14-207
Cow position:	chrX:17949615-17949435 (view UCSC Genome Browser custom track)
Alignm length:	194
Alignm identity:	143
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	30, 0
Conread position:	15-160
Cow position:	chrX:35284495-35284631 (view UCSC Genome Browser custom track)
Alignm length:	146
Alignm identity:	113
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	29, 0
Conread position:	15-197
Cow position:	chrX:31489386-31489570 (view UCSC Genome Browser custom track)
Alignm length:	191
Alignm identity:	142
Alignm E-value:	6e-25
Alignm gaps (pig, cow):	17, 108
Conread position:	15-198
Cow position:	chrX:47209220-47209395 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	138
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	74, 11
Conread position:	15-207
Cow position:	chrX:25035508-25035324 (view UCSC Genome Browser custom track)
Alignm length:	193
Alignm identity:	136
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	38, 0
Conread position:	15-212
Cow position:	chrX:48243585-48243400 (view UCSC Genome Browser custom track)
Alignm length:	200
Alignm identity:	146
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	131, 27
Conread position:	16-207
Cow position:	chrX:26625794-26625613 (view UCSC Genome Browser custom track)
Alignm length:	196
Alignm identity:	146
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	13, 27
Conread position:	17-121
Cow position:	chrX:41764519-41764622 (view UCSC Genome Browser custom track)
Alignm length:	106
Alignm identity:	89
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	26, 37
Conread position:	17-129
Cow position:	chrX:25411718-25411825 (view UCSC Genome Browser custom track)
Alignm length:	113
Alignm identity:	92
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	23, 0
Conread position:	17-179
Cow position:	chrX:31252296-31252449 (view UCSC Genome Browser custom track)
Alignm length:	164
Alignm identity:	127
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	130, 25
Conread position:	17-183
Cow position:	chrX:26285857-26286017 (view UCSC Genome Browser custom track)
Alignm length:	171
Alignm identity:	129
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	125, 25
Conread position:	17-186
Cow position:	chrX:27174873-27175042 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	128
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	93, 23
Conread position:	17-187
Cow position:	chrX:4091523-4091680 (view UCSC Genome Browser custom track)
Alignm length:	171
Alignm identity:	129
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	25, 0
Conread position:	17-188
Cow position:	chrX:43049226-43049384 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	131
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	25, 0
Conread position:	17-190
Cow position:	chrX:47379600-47379424 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	132
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	31, 110
Conread position:	17-196
Cow position:	chrX:21672433-21672603 (view UCSC Genome Browser custom track)
Alignm length:	180
Alignm identity:	138
Alignm E-value:	9e-30
Alignm gaps (pig, cow):	25, 0
Conread position:	17-197
Cow position:	chrX:27772083-27771915 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	133
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	25, 0