Cow genome map
| Conread name: | LyN1-MLN01G050004 |
| Conread position: | 279-580 |
| Cow position: | chr1:53311426-53311726 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-706 |
| Cow position: | chr1:102431543-102431111 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 274 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 279-739 |
| Cow position: | chr1:25053391-25052924 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 118 |
| Conread position: | 279-777 |
| Cow position: | chr1:100591576-100591071 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chr1:29037738-29038244 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 17 |
| Conread position: | 279-778 |
| Cow position: | chr1:29428795-29429308 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 332 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chr1:31646428-31645925 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chr1:40681535-40681026 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 279-778 |
| Cow position: | chr1:54933124-54933631 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chr1:57759111-57759613 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 322 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 200, 89 |
| Conread position: | 279-778 |
| Cow position: | chr1:63341276-63340769 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chr1:66490777-66491281 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chr1:69671425-69670918 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chr1:71794729-71795236 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chr1:72766840-72766332 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 330 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chr1:78587262-78586754 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chr1:78921817-78921305 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chr1:84446875-84447385 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 279-778 |
| Cow position: | chr1:89234836-89234329 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chr1:91105238-91105742 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 332 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-784 |
| Cow position: | chr1:71792126-71792639 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-784 |
| Cow position: | chr1:76618278-76617769 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 333 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-785 |
| Cow position: | chr1:28876293-28876809 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 280-779 |
| Cow position: | chr1:82920941-82920437 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 15 |
| Conread position: | 281-778 |
| Cow position: | chr1:86599817-86599307 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 35 |
| Conread position: | 281-783 |
| Cow position: | chr1:89493032-89492532 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 330 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 12, 35 |
| Conread position: | 285-778 |
| Cow position: | chr1:55044058-55043560 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 322 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 286, 29 |
| Conread position: | 286-777 |
| Cow position: | chr1:11854740-11854253 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 328 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 193, 29 |
| Conread position: | 286-778 |
| Cow position: | chr1:35598606-35598107 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 29 |
| Conread position: | 286-778 |
| Cow position: | chr1:90393551-90393055 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 193, 27 |
| Conread position: | 290-777 |
| Cow position: | chr1:8602768-8602273 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 25 |
| Conread position: | 304-589 |
| Cow position: | chr1:61536495-61536220 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 11 |
| Conread position: | 309-546 |
| Cow position: | chr1:81868249-81868020 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 68, 93 |
| Conread position: | 314-778 |
| Cow position: | chr1:73762314-73761847 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 307 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 72, 80 |
| Conread position: | 314-778 |
| Cow position: | chr1:76749157-76748691 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 73 |
| Conread position: | 315-529 |
| Cow position: | chr1:2181353-2181565 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 87 |
| Conread position: | 315-597 |
| Cow position: | chr1:29656418-29656700 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 106, 237 |
| Conread position: | 315-710 |
| Cow position: | chr1:91890159-91889771 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 99, 82 |
| Conread position: | 315-741 |
| Cow position: | chr1:79334755-79334320 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 82 |
| Conread position: | 315-778 |
| Cow position: | chr1:38711944-38712417 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 82 |
| Conread position: | 315-784 |
| Cow position: | chr1:87939048-87938571 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 72 |
| Conread position: | 316-783 |
| Cow position: | chr1:64717659-64717185 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 78 |
| Conread position: | 318-778 |
| Cow position: | chr1:18195830-18196299 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 83 |
| Conread position: | 320-758 |
| Cow position: | chr1:44701542-44701110 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 42 |
| Conread position: | 330-495 |
| Cow position: | chr1:93463338-93463507 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 73 |
| Conread position: | 331-780 |
| Cow position: | chr1:82091143-82091598 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 300 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 148, 43 |
| Conread position: | 332-780 |
| Cow position: | chr1:1106617-1107061 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 67 |
Show alignments to all cow chromosomes.