Cow genome map
| Conread name: | LyN1-MLN01G050004 |
| Conread position: | 276-778 |
| Cow position: | chr3:48603323-48603842 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 333 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 203, 121 |
| Conread position: | 279-589 |
| Cow position: | chr3:55895029-55895334 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 31 |
| Conread position: | 279-589 |
| Cow position: | chr3:56719252-56718949 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-646 |
| Cow position: | chr3:82363859-82364230 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 200, 124 |
| Conread position: | 279-710 |
| Cow position: | chr3:81101152-81101592 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-726 |
| Cow position: | chr3:13723638-13723182 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-754 |
| Cow position: | chr3:18814580-18815063 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-772 |
| Cow position: | chr3:64024958-64024464 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chr3:11417620-11418128 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chr3:20379643-20379138 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 328 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chr3:20795367-20795875 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 102 |
| Conread position: | 279-778 |
| Cow position: | chr3:31423053-31422544 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 327 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chr3:65085008-65085515 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chr3:73451240-73450731 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 328 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chr3:74060543-74061049 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chr3:75038768-75038260 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 118 |
| Conread position: | 279-778 |
| Cow position: | chr3:76000887-76000379 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 324 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 198, 89 |
| Conread position: | 279-785 |
| Cow position: | chr3:14863958-14864472 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 335 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 281-544 |
| Cow position: | chr3:31121059-31120798 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 108, 25 |
| Conread position: | 281-779 |
| Cow position: | chr3:13276204-13275695 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 326 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 187, 25 |
| Conread position: | 281-783 |
| Cow position: | chr3:56148370-56148879 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 337 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 146, 25 |
| Conread position: | 283-776 |
| Cow position: | chr3:66829859-66829369 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 31 |
| Conread position: | 285-729 |
| Cow position: | chr3:46752928-46753381 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 194, 32 |
| Conread position: | 285-778 |
| Cow position: | chr3:49416766-49416269 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 326 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 194, 30 |
| Conread position: | 286-777 |
| Cow position: | chr3:34557288-34556809 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 319 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 103, 23 |
| Conread position: | 292-778 |
| Cow position: | chr3:38869655-38870147 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 23 |
| Conread position: | 299-566 |
| Cow position: | chr3:56577845-56577590 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 103 |
| Conread position: | 299-588 |
| Cow position: | chr3:74140815-74140538 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 77, 63 |
| Conread position: | 315-776 |
| Cow position: | chr3:33125145-33124679 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 82 |
| Conread position: | 315-777 |
| Cow position: | chr3:10243769-10244240 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 82 |
| Conread position: | 315-778 |
| Cow position: | chr3:2117556-2118034 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 95 |
| Conread position: | 315-784 |
| Cow position: | chr3:31383859-31383406 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 88 |
| Conread position: | 318-587 |
| Cow position: | chr3:21016686-21016418 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 81 |
| Conread position: | 318-710 |
| Cow position: | chr3:29801921-29802323 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 84 |
| Conread position: | 318-778 |
| Cow position: | chr3:59332694-59333140 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 301 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 51, 64 |
| Conread position: | 318-779 |
| Cow position: | chr3:14284848-14285310 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 51 |
| Conread position: | 318-783 |
| Cow position: | chr3:1483142-1483606 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 86 |
| Conread position: | 318-785 |
| Cow position: | chr3:19831040-19830580 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 318-788 |
| Cow position: | chr3:16884191-16883742 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 44 |
| Conread position: | 326-620 |
| Cow position: | chr3:27674596-27674296 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 51, 36 |
Show alignments to all cow chromosomes.