Cow genome map
| Conread name: | LyN1-MLN01G050004 |
| Conread position: | 276-754 |
| Cow position: | chrX:13205907-13206391 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 315 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 279-616 |
| Cow position: | chrX:31803844-31804180 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 279-710 |
| Cow position: | chrX:21793545-21793986 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-739 |
| Cow position: | chrX:20953489-20953957 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 36 |
| Conread position: | 279-764 |
| Cow position: | chrX:12307807-12307308 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 316 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-764 |
| Cow position: | chrX:24588779-24588290 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 118 |
| Conread position: | 279-778 |
| Cow position: | chrX:672038-671540 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chrX:2479673-2479164 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 328 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chrX:2579374-2579882 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 102 |
| Conread position: | 279-778 |
| Cow position: | chrX:11976490-11975983 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chrX:16360052-16359546 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chrX:17054523-17055032 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 83 |
| Conread position: | 279-778 |
| Cow position: | chrX:18950781-18950273 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chrX:21226434-21226937 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 279-778 |
| Cow position: | chrX:21685574-21686082 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chrX:23395562-23396070 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chrX:23452492-23451982 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chrX:27977877-27977368 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 118 |
| Conread position: | 279-778 |
| Cow position: | chrX:31978885-31978378 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chrX:37404274-37403773 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 327 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chrX:38961895-38961383 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-778 |
| Cow position: | chrX:46296617-46297123 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 279-779 |
| Cow position: | chrX:27983396-27982906 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 316 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 279-785 |
| Cow position: | chrX:24769901-24769387 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 280-778 |
| Cow position: | chrX:3418180-3417674 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 280-778 |
| Cow position: | chrX:23986206-23986712 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 285-710 |
| Cow position: | chrX:29916383-29915951 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 150, 29 |
| Conread position: | 285-741 |
| Cow position: | chrX:23572855-23572390 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 31 |
| Conread position: | 285-768 |
| Cow position: | chrX:1549928-1550418 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 21 |
| Conread position: | 286-778 |
| Cow position: | chrX:27754391-27754892 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 30 |
| Conread position: | 289-589 |
| Cow position: | chrX:20674831-20675132 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 114 |
| Conread position: | 290-772 |
| Cow position: | chrX:2559995-2559503 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 92 |
| Conread position: | 290-778 |
| Cow position: | chrX:35532819-35533314 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 93 |
| Conread position: | 296-778 |
| Cow position: | chrX:2486661-2486167 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 81 |
| Conread position: | 297-475 |
| Cow position: | chrX:13220156-13219978 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 99 |
| Conread position: | 298-778 |
| Cow position: | chrX:3360796-3361284 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 18 |
| Conread position: | 298-778 |
| Cow position: | chrX:29083042-29083541 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 321 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 181, 17 |
| Conread position: | 314-541 |
| Cow position: | chrX:20589998-20590223 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 88 |
| Conread position: | 314-778 |
| Cow position: | chrX:32584940-32584469 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 313 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 113, 83 |
| Conread position: | 314-783 |
| Cow position: | chrX:23974447-23973977 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 88 |
| Conread position: | 315-620 |
| Cow position: | chrX:16858680-16858393 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 87 |
| Conread position: | 315-701 |
| Cow position: | chrX:29892078-29892472 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 253 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 74, 92 |
| Conread position: | 315-712 |
| Cow position: | chrX:21414858-21415264 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 167, 82 |
| Conread position: | 315-717 |
| Cow position: | chrX:22539042-22538631 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 164, 82 |
| Conread position: | 315-760 |
| Cow position: | chrX:19650499-19650067 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 320 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 64, 75 |
| Conread position: | 315-778 |
| Cow position: | chrX:7551810-7551340 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 82 |
| Conread position: | 315-779 |
| Cow position: | chrX:42732863-42733330 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 298 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 165, 82 |
| Conread position: | 316-575 |
| Cow position: | chrX:23352864-23353120 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 61, 86 |
| Conread position: | 318-588 |
| Cow position: | chrX:15989498-15989230 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 59, 84 |
| Conread position: | 318-778 |
| Cow position: | chrX:18193684-18194153 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 79 |
| Conread position: | 322-688 |
| Cow position: | chrX:25146559-25146929 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 97 |
| Conread position: | 331-781 |
| Cow position: | chrX:21254786-21255242 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 80 |
Show alignments to all cow chromosomes.