Cow genome map

Conread name: LyN1-MLN01G120037

Conread position: 1-174
Cow position: chr16:36240875-36241045 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 115

Conread position: 3-154
Cow position: chr16:3348529-3348686 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 65, 133

Conread position: 3-154
Cow position: chr16:23985031-23985189 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 3-167
Cow position: chr16:2481395-2481224 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 3-173
Cow position: chr16:1433912-1434095 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 3-173
Cow position: chr16:16239377-16239200 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 3-173
Cow position: chr16:26991228-26991049 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 3-173
Cow position: chr16:42162469-42162642 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 66, 118

Conread position: 3-174
Cow position: chr16:625096-625270 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:839004-839182 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:2237049-2236871 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:2303849-2304027 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 64, 0

Conread position: 3-174
Cow position: chr16:3010560-3010734 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 65, 118

Conread position: 3-174
Cow position: chr16:3031781-3031603 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:3144674-3144500 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 64, 121

Conread position: 3-174
Cow position: chr16:3149306-3149132 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 64, 121

Conread position: 3-174
Cow position: chr16:4462605-4462427 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:5487491-5487669 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:5528910-5529088 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:6944991-6945155 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 113, 64

Conread position: 3-174
Cow position: chr16:7466334-7466512 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:10373961-10373783 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:11284942-11285116 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 118

Conread position: 3-174
Cow position: chr16:11634431-11634254 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 19

Conread position: 3-174
Cow position: chr16:15811789-15811967 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:15980665-15980487 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:16268173-16267995 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 151
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:20277574-20277752 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:20642230-20642406 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:21188955-21189133 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:23097470-23097296 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 118

Conread position: 3-174
Cow position: chr16:23250257-23250089 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 112, 14

Conread position: 3-174
Cow position: chr16:23876803-23876631 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 65, 118

Conread position: 3-174
Cow position: chr16:24406637-24406814 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 3-174
Cow position: chr16:26665437-26665615 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:27595239-27595417 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:28168597-28168419 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:28194579-28194401 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:32325576-32325754 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 61, 0

Conread position: 3-174
Cow position: chr16:34505418-34505596 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 145
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:39034980-39034804 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 65, 129

Conread position: 3-174
Cow position: chr16:41161743-41161571 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 65, 118

Conread position: 3-174
Cow position: chr16:43895542-43895364 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:46521328-46521151 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 147
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 65, 18

Conread position: 3-174
Cow position: chr16:47403104-47403282 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:47787679-47787857 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:51402129-51401951 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 147
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 67, 0

Conread position: 3-174
Cow position: chr16:52525952-52526130 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:53446050-53445872 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr16:54323599-54323421 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 3-184
Cow position: chr16:43771215-43771400 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 65, 123

Conread position: 3-188
Cow position: chr16:5762504-5762695 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 153
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 65, 181

Conread position: 3-188
Cow position: chr16:25087331-25087525 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 64, 0

Conread position: 3-258
Cow position: chr16:14663585-14663325 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 65, 177

Conread position: 4-166
Cow position: chr16:25343698-25343867 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 4-168
Cow position: chr16:37443795-37443629 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 64, 19

Conread position: 4-169
Cow position: chr16:23672334-23672506 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 4-174
Cow position: chr16:194184-194012 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 135

Conread position: 4-174
Cow position: chr16:4388458-4388635 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 4-174
Cow position: chr16:40294448-40294272 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 4-227
Cow position: chr16:2273785-2274021 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 9

Conread position: 5-173
Cow position: chr16:22799947-22799771 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 5-174
Cow position: chr16:5526379-5526207 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 119

Conread position: 5-174
Cow position: chr16:15411325-15411153 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 63, 119

Conread position: 5-174
Cow position: chr16:20203723-20203899 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 0

Conread position: 6-174
Cow position: chr16:51086505-51086681 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 62, 0

Conread position: 6-188
Cow position: chr16:17110996-17111188 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 19-173
Cow position: chr16:23562187-23562349 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 23-174
Cow position: chr16:3331651-3331809 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 131
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 0

Show alignments to all cow chromosomes.