Cow genome map
| Conread name: | LyN1-MLN01G120037 |
| Conread position: | 3-165 |
| Cow position: | chr17:2176269-2176439 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 3-172 |
| Cow position: | chr17:6070823-6070994 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 65, 129 |
| Conread position: | 3-173 |
| Cow position: | chr17:147219-147397 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-173 |
| Cow position: | chr17:1705688-1705864 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-173 |
| Cow position: | chr17:13930180-13930357 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:40591-40769 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:253106-253286 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:1570101-1569923 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:1785714-1785548 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 117, 88 |
| Conread position: | 3-174 |
| Cow position: | chr17:2264474-2264652 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:3742449-3742627 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:4062618-4062796 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:5307450-5307272 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:6262149-6262327 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:8210940-8211118 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:11380901-11380723 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:13418689-13418867 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:14251021-14250839 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:15438084-15438262 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:15709704-15709526 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:15808260-15808438 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:15853009-15853187 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:16855809-16855631 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:17127256-17127434 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:17257808-17257982 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 65, 118 |
| Conread position: | 3-174 |
| Cow position: | chr17:18100795-18100617 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:19979839-19979663 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:20098025-20097851 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 65, 38 |
| Conread position: | 3-174 |
| Cow position: | chr17:21714272-21714449 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:23322139-23321964 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 65, 155 |
| Conread position: | 3-174 |
| Cow position: | chr17:24784455-24784633 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:25738586-25738764 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:27792494-27792316 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:29825676-29825504 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 64, 118 |
| Conread position: | 3-174 |
| Cow position: | chr17:38828204-38828380 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 65, 102 |
| Conread position: | 3-175 |
| Cow position: | chr17:21768826-21768647 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-471 |
| Cow position: | chr17:11085393-11084919 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 65, 463 |
| Conread position: | 4-147 |
| Cow position: | chr17:41412138-41412282 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 4-150 |
| Cow position: | chr17:4210302-4210455 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-157 |
| Cow position: | chr17:20079599-20079436 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 4-160 |
| Cow position: | chr17:51908-51747 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-174 |
| Cow position: | chr17:1655464-1655287 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-174 |
| Cow position: | chr17:4084310-4084480 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 128, 61 |
| Conread position: | 4-174 |
| Cow position: | chr17:15373704-15373870 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 116, 81 |
| Conread position: | 4-174 |
| Cow position: | chr17:22562435-22562612 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 146 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 5-166 |
| Cow position: | chr17:39950776-39950608 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 5-174 |
| Cow position: | chr17:15327574-15327745 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 63, 136 |
| Conread position: | 6-169 |
| Cow position: | chr17:40809485-40809651 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 62, 118 |
| Conread position: | 23-174 |
| Cow position: | chr17:11785186-11785344 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 45, 0 |
Show alignments to all cow chromosomes.