Cow genome map
| Conread name: | LyN1-MLN01G120037 |
| Conread position: | 2-174 |
| Cow position: | chr21:3781370-3781549 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 2-174 |
| Cow position: | chr21:4186529-4186710 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 2-174 |
| Cow position: | chr21:19613321-19613500 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 3-140 |
| Cow position: | chr21:10519403-10519547 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-146 |
| Cow position: | chr21:20742082-20741932 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 3-152 |
| Cow position: | chr21:35143322-35143166 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-166 |
| Cow position: | chr21:17143261-17143431 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-169 |
| Cow position: | chr21:37040032-37039859 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-169 |
| Cow position: | chr21:39427661-39427835 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-169 |
| Cow position: | chr21:44763377-44763204 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-172 |
| Cow position: | chr21:7154919-7155094 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 3-173 |
| Cow position: | chr21:26700080-26699903 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-173 |
| Cow position: | chr21:32397466-32397288 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-173 |
| Cow position: | chr21:36375573-36375751 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-173 |
| Cow position: | chr21:37373811-37373987 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 65, 121 |
| Conread position: | 3-174 |
| Cow position: | chr21:148732-148910 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr21:2538565-2538388 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 65, 104 |
| Conread position: | 3-174 |
| Cow position: | chr21:4078632-4078810 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr21:5938046-5938224 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr21:6966882-6966710 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 65, 118 |
| Conread position: | 3-174 |
| Cow position: | chr21:7063085-7062907 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 3-174 |
| Cow position: | chr21:10852850-10853027 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 65, 139 |
| Conread position: | 3-174 |
| Cow position: | chr21:11291273-11291451 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr21:13112808-13112630 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr21:13299431-13299602 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 65, 115 |
| Conread position: | 3-174 |
| Cow position: | chr21:15398391-15398213 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr21:19352278-19352100 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr21:26634573-26634396 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 65, 99 |
| Conread position: | 3-174 |
| Cow position: | chr21:27068376-27068198 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr21:27148971-27148791 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr21:27286029-27286207 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr21:27620913-27620735 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr21:28614901-28615080 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 65, 39 |
| Conread position: | 3-174 |
| Cow position: | chr21:28879130-28878954 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 65, 43 |
| Conread position: | 3-174 |
| Cow position: | chr21:34902797-34902624 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 65, 135 |
| Conread position: | 3-174 |
| Cow position: | chr21:39225471-39225298 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 117 |
| Conread position: | 3-174 |
| Cow position: | chr21:41797138-41796960 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr21:42916378-42916554 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr21:47647920-47648098 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr21:47943537-47943710 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 65, 18 |
| Conread position: | 3-178 |
| Cow position: | chr21:31513734-31513559 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 135 |
| Conread position: | 3-191 |
| Cow position: | chr21:49297410-49297604 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 186 |
| Conread position: | 3-772 |
| Cow position: | chr21:4091918-4092693 (view UCSC Genome Browser custom track) |
| Alignm length: | 777 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 175 |
| Conread position: | 4-173 |
| Cow position: | chr21:30596503-30596327 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-174 |
| Cow position: | chr21:24948691-24948870 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 4-174 |
| Cow position: | chr21:34656547-34656723 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 64, 90 |
| Conread position: | 4-184 |
| Cow position: | chr21:469688-469871 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 63, 123 |
| Conread position: | 4-188 |
| Cow position: | chr21:2418791-2418977 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 64, 169 |
| Conread position: | 5-174 |
| Cow position: | chr21:2513438-2513609 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 130 |
| Conread position: | 5-174 |
| Cow position: | chr21:2879241-2879065 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 5-174 |
| Cow position: | chr21:34256006-34255831 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 63, 121 |
| Conread position: | 6-174 |
| Cow position: | chr21:995842-995672 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 128 |
| Conread position: | 6-174 |
| Cow position: | chr21:33256142-33256317 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 6-174 |
| Cow position: | chr21:33317916-33317741 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-166 |
| Cow position: | chr21:25189230-25189396 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 88 |
| Conread position: | 7-174 |
| Cow position: | chr21:15548285-15548111 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 9-174 |
| Cow position: | chr21:41813-41985 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 15-174 |
| Cow position: | chr21:5544053-5543887 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.