Cow genome map
| Conread name: | LyN1-MLN01G120037 |
| Conread position: | 3-139 |
| Cow position: | chr4:5442389-5442246 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-149 |
| Cow position: | chr4:34176843-34176690 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-167 |
| Cow position: | chr4:15459265-15459093 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-169 |
| Cow position: | chr4:33495701-33495871 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 65, 91 |
| Conread position: | 3-169 |
| Cow position: | chr4:43883256-43883428 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 65, 23 |
| Conread position: | 3-169 |
| Cow position: | chr4:65889728-65889898 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 65, 45 |
| Conread position: | 3-172 |
| Cow position: | chr4:9798098-9797926 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 65, 40 |
| Conread position: | 3-172 |
| Cow position: | chr4:25877548-25877718 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 65, 97 |
| Conread position: | 3-173 |
| Cow position: | chr4:6864088-6863914 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 121 |
| Conread position: | 3-173 |
| Cow position: | chr4:16061421-16061598 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-173 |
| Cow position: | chr4:17234187-17234360 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 64, 118 |
| Conread position: | 3-173 |
| Cow position: | chr4:32214315-32214493 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-173 |
| Cow position: | chr4:33070699-33070524 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 65, 129 |
| Conread position: | 3-173 |
| Cow position: | chr4:43869592-43869767 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 65, 86 |
| Conread position: | 3-174 |
| Cow position: | chr4:358023-358201 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:532023-532201 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:1048112-1047934 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:1369856-1369681 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 29, 36 |
| Conread position: | 3-174 |
| Cow position: | chr4:2350577-2350399 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:3355822-3355643 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:4378533-4378711 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:6267073-6266895 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:6488228-6488052 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 109 |
| Conread position: | 3-174 |
| Cow position: | chr4:9040086-9040264 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:13463951-13464130 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:15815354-15815177 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 65, 109 |
| Conread position: | 3-174 |
| Cow position: | chr4:16640751-16640929 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:17034362-17034184 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:18336807-18336629 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:28174940-28174763 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 65, 99 |
| Conread position: | 3-174 |
| Cow position: | chr4:33021487-33021309 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:35306667-35306496 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 113, 100 |
| Conread position: | 3-174 |
| Cow position: | chr4:40216981-40217159 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:41473702-41473524 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:41956906-41957080 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 65, 118 |
| Conread position: | 3-174 |
| Cow position: | chr4:41961042-41961215 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 65, 118 |
| Conread position: | 3-174 |
| Cow position: | chr4:42406762-42406940 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:46712456-46712279 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:47263206-47263028 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:54811721-54811544 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 65, 99 |
| Conread position: | 3-174 |
| Cow position: | chr4:57986159-57986337 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:58812626-58812804 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:62907690-62907868 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr4:63000284-63000458 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 65, 118 |
| Conread position: | 3-174 |
| Cow position: | chr4:64799200-64799373 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 65, 92 |
| Conread position: | 3-175 |
| Cow position: | chr4:8378069-8378247 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-184 |
| Cow position: | chr4:36898520-36898708 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 92 |
| Conread position: | 3-194 |
| Cow position: | chr4:6568519-6568719 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 138 |
| Conread position: | 4-118 |
| Cow position: | chr4:19263455-19263575 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-169 |
| Cow position: | chr4:67382427-67382599 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-173 |
| Cow position: | chr4:27372862-27372684 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-173 |
| Cow position: | chr4:28834708-28834883 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 64, 13 |
| Conread position: | 4-174 |
| Cow position: | chr4:161308-161485 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 4-174 |
| Cow position: | chr4:5611852-5611675 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 4-174 |
| Cow position: | chr4:8671463-8671640 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 4-174 |
| Cow position: | chr4:12606733-12606562 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 61, 24 |
| Conread position: | 4-174 |
| Cow position: | chr4:29605333-29605157 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 4-174 |
| Cow position: | chr4:30541313-30541140 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 117 |
| Conread position: | 4-174 |
| Cow position: | chr4:67683337-67683514 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-182 |
| Cow position: | chr4:27336078-27336265 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 64, 177 |
| Conread position: | 4-183 |
| Cow position: | chr4:18327097-18327284 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 5-173 |
| Cow position: | chr4:25225044-25224870 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 139 |
| Conread position: | 5-174 |
| Cow position: | chr4:25597344-25597169 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 63, 90 |
| Conread position: | 6-166 |
| Cow position: | chr4:34182557-34182394 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 6-167 |
| Cow position: | chr4:10883683-10883845 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 62, 118 |
| Conread position: | 7-180 |
| Cow position: | chr4:67393411-67393591 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 61, 123 |
| Conread position: | 13-174 |
| Cow position: | chr4:44594215-44594047 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 14-174 |
| Cow position: | chr4:16362356-16362522 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 14-174 |
| Cow position: | chr4:18815449-18815282 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 21-174 |
| Cow position: | chr4:30473591-30473751 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 28-183 |
| Cow position: | chr4:55510684-55510517 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.