Cow genome map
| Conread name: | LyN1-MLN01G120037 |
| Conread position: | 1-173 |
| Cow position: | chr5:26095797-26095971 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 67, 143 |
| Conread position: | 1-174 |
| Cow position: | chr5:30581576-30581756 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-174 |
| Cow position: | chr5:40759600-40759420 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 3-133 |
| Cow position: | chr5:24297130-24297267 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-138 |
| Cow position: | chr5:40922452-40922309 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-143 |
| Cow position: | chr5:57001743-57001890 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-155 |
| Cow position: | chr5:14544061-14543902 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-166 |
| Cow position: | chr5:23667911-23667740 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-168 |
| Cow position: | chr5:23685120-23684954 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 39 |
| Conread position: | 3-169 |
| Cow position: | chr5:46649389-46649558 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 126 |
| Conread position: | 3-173 |
| Cow position: | chr5:40348043-40347863 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-173 |
| Cow position: | chr5:58190514-58190336 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-173 |
| Cow position: | chr5:59062884-59063059 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 65, 121 |
| Conread position: | 3-174 |
| Cow position: | chr5:1339681-1339504 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 65, 136 |
| Conread position: | 3-174 |
| Cow position: | chr5:3966678-3966854 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:4879222-4879400 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:4964133-4963955 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:5105464-5105642 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:5925721-5925543 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:6152651-6152473 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:6586221-6586043 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:7276073-7276251 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:10514034-10513856 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:10921085-10921261 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:11922886-11922708 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:12730470-12730292 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:18120233-18120055 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:18559163-18558985 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:18703901-18704079 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:23958084-23957909 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 65, 116 |
| Conread position: | 3-174 |
| Cow position: | chr5:26076960-26076782 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:26366823-26367001 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:27196840-27196662 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:29031513-29031691 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:30156598-30156776 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:31099020-31098842 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:31708829-31709007 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:34191174-34191352 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 42, 122 |
| Conread position: | 3-174 |
| Cow position: | chr5:34583876-34584054 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:35988763-35988588 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:38661573-38661751 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:45702561-45702739 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:46627027-46626848 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:46666248-46666426 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:46670550-46670728 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:46736040-46735862 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:46778761-46778935 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 65, 118 |
| Conread position: | 3-174 |
| Cow position: | chr5:46792091-46792269 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:47341963-47342133 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 137 |
| Conread position: | 3-174 |
| Cow position: | chr5:47828083-47827904 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:49520956-49521136 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 118 |
| Conread position: | 3-174 |
| Cow position: | chr5:50832129-50832307 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:51167067-51166889 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:54928671-54928495 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:58141999-58141824 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 65, 20 |
| Conread position: | 3-174 |
| Cow position: | chr5:59083985-59083806 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:59145613-59145792 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:64779764-64779586 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-174 |
| Cow position: | chr5:71622060-71621882 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-175 |
| Cow position: | chr5:21523565-21523386 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 3-175 |
| Cow position: | chr5:42507002-42507177 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 65, 116 |
| Conread position: | 3-184 |
| Cow position: | chr5:73443657-73443843 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 64, 44 |
| Conread position: | 3-188 |
| Cow position: | chr5:26625963-26625768 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 4-173 |
| Cow position: | chr5:4602754-4602930 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-174 |
| Cow position: | chr5:7141860-7141684 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-174 |
| Cow position: | chr5:27550218-27550041 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 4-174 |
| Cow position: | chr5:45180852-45180675 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-174 |
| Cow position: | chr5:49118101-49117924 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 5-174 |
| Cow position: | chr5:444069-443893 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 59, 106 |
| Conread position: | 5-174 |
| Cow position: | chr5:12680353-12680177 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 6-174 |
| Cow position: | chr5:3788469-3788645 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 6-174 |
| Cow position: | chr5:41979742-41979902 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 114, 67 |
| Conread position: | 9-174 |
| Cow position: | chr5:50390874-50390701 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 14-145 |
| Cow position: | chr5:12641189-12641051 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 14-174 |
| Cow position: | chr5:29768338-29768503 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 53, 80 |
| Conread position: | 28-174 |
| Cow position: | chr5:9092154-9092004 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 118 |
Show alignments to all cow chromosomes.