Cow genome map

Conread name: LyN1-MLN01G120037

Conread position: 2-174
Cow position: chr9:54680434-54680256 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 65, 8

Conread position: 3-149
Cow position: chr9:2872789-2872943 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 3-155
Cow position: chr9:42312000-42312159 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 3-155
Cow position: chr9:45875827-45875986 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 3-168
Cow position: chr9:21411617-21411789 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 139
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 65, 0

Conread position: 3-169
Cow position: chr9:1992228-1992055 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 3-169
Cow position: chr9:6765463-6765291 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 64, 165

Conread position: 3-173
Cow position: chr9:44203761-44203583 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 3-173
Cow position: chr9:56302132-56301954 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 3-173
Cow position: chr9:59196163-59196340 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:202983-202805 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:649736-649564 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 32

Conread position: 3-174
Cow position: chr9:792005-791826 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 56, 0

Conread position: 3-174
Cow position: chr9:1098901-1099079 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:1249686-1249512 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 63, 118

Conread position: 3-174
Cow position: chr9:1728997-1728819 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:1983126-1983303 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 63, 24

Conread position: 3-174
Cow position: chr9:2213453-2213631 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:2807049-2806871 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:3310926-3311104 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:3577175-3577001 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 64, 117

Conread position: 3-174
Cow position: chr9:3805901-3806080 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:4941182-4941009 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 86

Conread position: 3-174
Cow position: chr9:5006284-5006462 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:5453560-5453738 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:5526327-5526149 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:5534910-5534732 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:5627124-5627304 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:6884637-6884815 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 3-174
Cow position: chr9:6921447-6921269 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:9015382-9015560 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:10324126-10324301 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:10939031-10939209 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:13473471-13473294 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 14

Conread position: 3-174
Cow position: chr9:14002350-14002525 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 119

Conread position: 3-174
Cow position: chr9:16177902-16178080 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:18538971-18539149 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:19077965-19078143 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 3-174
Cow position: chr9:19156973-19156799 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 121

Conread position: 3-174
Cow position: chr9:20940764-20940942 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:22473981-22473803 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:22655121-22655299 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:26421668-26421490 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:27037418-27037597 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 64, 0

Conread position: 3-174
Cow position: chr9:27897327-27897506 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 3-174
Cow position: chr9:28024117-28024295 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:28356873-28357050 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 67, 0

Conread position: 3-174
Cow position: chr9:28658741-28658563 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:28680283-28680460 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 60

Conread position: 3-174
Cow position: chr9:30829063-30829237 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 118

Conread position: 3-174
Cow position: chr9:31418196-31418018 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:31809890-31810064 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 65, 121

Conread position: 3-174
Cow position: chr9:32971685-32971863 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:34240792-34240614 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:34770464-34770642 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 147
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:35544221-35544043 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:37160506-37160323 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:37175112-37175290 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:44167902-44168076 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 56

Conread position: 3-174
Cow position: chr9:47005049-47005228 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:48795985-48795807 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:50326152-50326330 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:52525465-52525643 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 3-174
Cow position: chr9:54460240-54460067 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 118

Conread position: 3-174
Cow position: chr9:64006134-64005957 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 165

Conread position: 3-174
Cow position: chr9:64012913-64012735 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 3-175
Cow position: chr9:826625-826449 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 65, 137

Conread position: 3-175
Cow position: chr9:33069362-33069183 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 65, 0

Conread position: 3-179
Cow position: chr9:778508-778328 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 65, 165

Conread position: 3-182
Cow position: chr9:17632780-17632965 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 65, 0

Conread position: 3-184
Cow position: chr9:17900259-17900078 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 65, 116

Conread position: 3-185
Cow position: chr9:47044278-47044466 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 65, 175

Conread position: 3-198
Cow position: chr9:17062080-17061884 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 113

Conread position: 4-173
Cow position: chr9:2680883-2681060 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 4-173
Cow position: chr9:9198427-9198593 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 64, 111

Conread position: 4-173
Cow position: chr9:22441804-22441980 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 150
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 64, 0

Conread position: 4-174
Cow position: chr9:1063390-1063215 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 86

Conread position: 4-174
Cow position: chr9:1071977-1071800 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 4-174
Cow position: chr9:2485309-2485132 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 52, 133

Conread position: 4-174
Cow position: chr9:11503981-11504158 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 5-169
Cow position: chr9:52408992-52408836 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 115, 49

Conread position: 5-172
Cow position: chr9:43302910-43302739 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 63, 153

Conread position: 5-173
Cow position: chr9:56176084-56176256 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 63, 116

Conread position: 5-174
Cow position: chr9:27782581-27782405 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 6-174
Cow position: chr9:2288823-2288651 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 62, 146

Conread position: 7-171
Cow position: chr9:26082009-26081837 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 11-174
Cow position: chr9:2518637-2518467 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 11-174
Cow position: chr9:26276973-26277143 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 14-174
Cow position: chr9:1998986-1998830 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 15-173
Cow position: chr9:20780225-20780390 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 23-172
Cow position: chr9:15053555-15053399 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 26-174
Cow position: chr9:26054379-26054533 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 131

Conread position: 28-166
Cow position: chr9:1741519-1741374 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.