Cow genome map
| Conread name: | LyN1-MLN01H050003 |
| Conread position: | 5-405 |
| Cow position: | chr10:38792260-38791868 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 30 |
| Conread position: | 7-243 |
| Cow position: | chr10:21043440-21043663 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 7-259 |
| Cow position: | chr10:412447-412205 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 7-286 |
| Cow position: | chr10:4676355-4676087 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 146, 30 |
| Conread position: | 7-339 |
| Cow position: | chr10:24720302-24719968 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 25 |
| Conread position: | 7-404 |
| Cow position: | chr10:25925116-25925507 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 25 |
| Conread position: | 7-405 |
| Cow position: | chr10:10076103-10076488 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 25 |
| Conread position: | 7-405 |
| Cow position: | chr10:69887511-69887892 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 276 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 78, 30 |
| Conread position: | 32-469 |
| Cow position: | chr10:40598882-40598457 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 36-243 |
| Cow position: | chr10:12215603-12215404 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 36-243 |
| Cow position: | chr10:32096829-32096628 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 36-328 |
| Cow position: | chr10:31165516-31165231 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 11 |
| Conread position: | 36-339 |
| Cow position: | chr10:67295644-67295949 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 44, 75 |
| Conread position: | 36-405 |
| Cow position: | chr10:16753341-16753711 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 74 |
| Conread position: | 48-195 |
| Cow position: | chr10:61649837-61649693 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 48-405 |
| Cow position: | chr10:68256344-68256000 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 62 |
| Conread position: | 50-397 |
| Cow position: | chr10:34982417-34982731 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 289, 59 |
| Conread position: | 54-239 |
| Cow position: | chr10:33815966-33816146 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 55-370 |
| Cow position: | chr10:32307095-32306786 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 55 |
| Conread position: | 56-329 |
| Cow position: | chr10:62888313-62888069 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 56-339 |
| Cow position: | chr10:36818039-36817759 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 56 |
| Conread position: | 58-406 |
| Cow position: | chr10:4399735-4400077 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 51 |
| Conread position: | 59-365 |
| Cow position: | chr10:33136029-33135728 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 51 |
| Conread position: | 62-261 |
| Cow position: | chr10:33795240-33795042 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 32 |
| Conread position: | 62-405 |
| Cow position: | chr10:1339163-1338823 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 52 |
| Conread position: | 62-406 |
| Cow position: | chr10:55964888-55964549 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 49 |
| Conread position: | 64-242 |
| Cow position: | chr10:53797813-53797986 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 66-393 |
| Cow position: | chr10:30084750-30084428 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 67-396 |
| Cow position: | chr10:22588087-22587768 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 68-353 |
| Cow position: | chr10:14424085-14423804 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 42 |
| Conread position: | 75-249 |
| Cow position: | chr10:50347362-50347532 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 169, 34 |
| Conread position: | 78-405 |
| Cow position: | chr10:61535630-61535954 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 166, 31 |
| Conread position: | 83-380 |
| Cow position: | chr10:13337481-13337770 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 26 |
| Conread position: | 84-405 |
| Cow position: | chr10:51684745-51684427 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 26 |
| Conread position: | 112-239 |
| Cow position: | chr10:30085867-30085740 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 112-405 |
| Cow position: | chr10:47482063-47481779 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 34 |
| Conread position: | 115-404 |
| Cow position: | chr10:59341670-59341389 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 35 |
| Conread position: | 195-405 |
| Cow position: | chr10:6157694-6157489 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 49, 71 |
| Conread position: | 210-393 |
| Cow position: | chr10:67952499-67952681 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 35, 57 |
| Conread position: | 236-405 |
| Cow position: | chr10:21043927-21044093 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 243-353 |
| Cow position: | chr10:14423634-14423525 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 245-403 |
| Cow position: | chr10:32096414-32096260 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 247-408 |
| Cow position: | chr10:13876408-13876565 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 251-430 |
| Cow position: | chr10:53798162-53798331 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 156, 16 |
| Conread position: | 252-399 |
| Cow position: | chr10:411875-411729 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 253-407 |
| Cow position: | chr10:32892385-32892232 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 12 |
| Conread position: | 264-406 |
| Cow position: | chr10:15364168-15364027 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 265-398 |
| Cow position: | chr10:55922006-55922134 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 271-406 |
| Cow position: | chr10:21376524-21376657 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
Show alignments to all cow chromosomes.