Cow genome map
| Conread name: | LyN1-MLN01H050003 |
| Conread position: | 6-195 |
| Cow position: | chr18:34766602-34766785 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 130, 33 |
| Conread position: | 6-249 |
| Cow position: | chr18:55512228-55512465 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 238, 32 |
| Conread position: | 7-228 |
| Cow position: | chr18:3506351-3506137 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 52, 31 |
| Conread position: | 7-261 |
| Cow position: | chr18:4980811-4980568 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 237, 25 |
| Conread position: | 36-339 |
| Cow position: | chr18:8270634-8270335 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 128 |
| Conread position: | 36-396 |
| Cow position: | chr18:44075391-44075040 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 18 |
| Conread position: | 36-400 |
| Cow position: | chr18:9188793-9188441 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 36-401 |
| Cow position: | chr18:46094078-46093722 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 27 |
| Conread position: | 48-194 |
| Cow position: | chr18:17308081-17308223 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 62 |
| Conread position: | 52-405 |
| Cow position: | chr18:28100555-28100213 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 56-254 |
| Cow position: | chr18:29641481-29641287 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 185, 53 |
| Conread position: | 56-357 |
| Cow position: | chr18:11228039-11227746 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 53 |
| Conread position: | 56-357 |
| Cow position: | chr18:54137314-54137605 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 26 |
| Conread position: | 56-403 |
| Cow position: | chr18:4769831-4770178 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 53 |
| Conread position: | 58-249 |
| Cow position: | chr18:1095094-1095280 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 59-243 |
| Cow position: | chr18:1783365-1783188 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 59-408 |
| Cow position: | chr18:42287635-42287967 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 50 |
| Conread position: | 60-405 |
| Cow position: | chr18:49886083-49886430 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 10 |
| Conread position: | 62-405 |
| Cow position: | chr18:53533880-53533542 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 47 |
| Conread position: | 62-411 |
| Cow position: | chr18:53967504-53967159 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 47 |
| Conread position: | 63-322 |
| Cow position: | chr18:32858273-32858033 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 66-405 |
| Cow position: | chr18:8339724-8339401 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 43 |
| Conread position: | 67-256 |
| Cow position: | chr18:50054871-50055057 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 129, 42 |
| Conread position: | 83-236 |
| Cow position: | chr18:41424330-41424477 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 26 |
| Conread position: | 88-397 |
| Cow position: | chr18:53804640-53804334 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 181 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 169, 150 |
| Conread position: | 92-384 |
| Cow position: | chr18:13728738-13729024 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 219 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 266, 17 |
| Conread position: | 99-405 |
| Cow position: | chr18:15808430-15808135 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 112-405 |
| Cow position: | chr18:42818769-42819063 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 37 |
| Conread position: | 112-405 |
| Cow position: | chr18:46092899-46092621 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 122-437 |
| Cow position: | chr18:16405172-16404859 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 23 |
| Conread position: | 134-405 |
| Cow position: | chr18:44527901-44528173 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 134 |
| Conread position: | 151-407 |
| Cow position: | chr18:15807703-15807965 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 123 |
| Conread position: | 151-412 |
| Cow position: | chr18:29604761-29604498 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 20, 121 |
| Conread position: | 209-347 |
| Cow position: | chr18:34538287-34538147 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 237-401 |
| Cow position: | chr18:50055317-50055473 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 267-412 |
| Cow position: | chr18:4980276-4980133 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 299-409 |
| Cow position: | chr18:8652907-8653015 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
Show alignments to all cow chromosomes.