Cow genome map
| Conread name: | LyN1-MLN01H050003 |
| Conread position: | 7-239 |
| Cow position: | chr2:34585719-34585944 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 7-250 |
| Cow position: | chr2:47531149-47531385 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 237, 30 |
| Conread position: | 7-257 |
| Cow position: | chr2:61865449-61865693 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 78, 30 |
| Conread position: | 7-329 |
| Cow position: | chr2:47127818-47127501 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 7-370 |
| Cow position: | chr2:35900156-35900505 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 31 |
| Conread position: | 7-405 |
| Cow position: | chr2:47000030-46999639 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 30 |
| Conread position: | 8-215 |
| Cow position: | chr2:41362612-41362812 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 12-393 |
| Cow position: | chr2:38839095-38839465 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 23 |
| Conread position: | 13-405 |
| Cow position: | chr2:2667689-2667324 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 19 |
| Conread position: | 32-280 |
| Cow position: | chr2:9581137-9581375 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 35-326 |
| Cow position: | chr2:1481371-1481649 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 35-429 |
| Cow position: | chr2:39877755-39878133 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 74 |
| Conread position: | 36-405 |
| Cow position: | chr2:26282480-26282845 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 79 |
| Conread position: | 48-405 |
| Cow position: | chr2:77519131-77518774 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 22 |
| Conread position: | 52-229 |
| Cow position: | chr2:57317949-57317776 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 12, 58 |
| Conread position: | 56-224 |
| Cow position: | chr2:64662578-64662741 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 126, 53 |
| Conread position: | 56-328 |
| Cow position: | chr2:55499000-55499267 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 50 |
| Conread position: | 57-316 |
| Cow position: | chr2:2482720-2482478 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 176, 56 |
| Conread position: | 58-393 |
| Cow position: | chr2:20585248-20585564 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 177, 51 |
| Conread position: | 59-249 |
| Cow position: | chr2:15343176-15342998 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 185, 50 |
| Conread position: | 59-249 |
| Cow position: | chr2:39380205-39380019 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 185, 50 |
| Conread position: | 62-236 |
| Cow position: | chr2:39758379-39758209 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 62-405 |
| Cow position: | chr2:82140786-82140456 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 48 |
| Conread position: | 64-337 |
| Cow position: | chr2:70183328-70183072 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 79, 35 |
| Conread position: | 65-349 |
| Cow position: | chr2:38902884-38903167 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 17 |
| Conread position: | 68-399 |
| Cow position: | chr2:49000381-49000709 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 45 |
| Conread position: | 69-351 |
| Cow position: | chr2:44344788-44344520 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 228, 40 |
| Conread position: | 75-244 |
| Cow position: | chr2:41437347-41437188 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 79-228 |
| Cow position: | chr2:57343559-57343416 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 79-234 |
| Cow position: | chr2:76045690-76045540 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 90-406 |
| Cow position: | chr2:38168461-38168770 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 19 |
| Conread position: | 112-335 |
| Cow position: | chr2:9696338-9696117 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 133, 49 |
| Conread position: | 112-392 |
| Cow position: | chr2:57647588-57647861 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 132, 146 |
| Conread position: | 191-405 |
| Cow position: | chr2:39871799-39872010 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 53, 74 |
| Conread position: | 195-405 |
| Cow position: | chr2:25651184-25651387 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 207-404 |
| Cow position: | chr2:7309244-7309051 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 207-405 |
| Cow position: | chr2:2191876-2192070 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 232-399 |
| Cow position: | chr2:34586167-34586342 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 35 |
| Conread position: | 244-405 |
| Cow position: | chr2:43881170-43881014 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 253-393 |
| Cow position: | chr2:61865923-61866059 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 12 |
| Conread position: | 263-405 |
| Cow position: | chr2:55344745-55344605 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 277-405 |
| Cow position: | chr2:41437186-41437061 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.