Cow genome map
| Conread name: | LyN1-MLN01H050003 |
| Conread position: | 5-406 |
| Cow position: | chr29:11282955-11282558 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 29 |
| Conread position: | 7-405 |
| Cow position: | chr29:31843356-31843743 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 30 |
| Conread position: | 7-406 |
| Cow position: | chr29:19651682-19651296 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 17 |
| Conread position: | 7-406 |
| Cow position: | chr29:19662769-19662383 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 36-263 |
| Cow position: | chr29:44695520-44695295 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 68, 18 |
| Conread position: | 48-405 |
| Cow position: | chr29:8790364-8790689 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 8, 59 |
| Conread position: | 54-362 |
| Cow position: | chr29:5224637-5224338 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 56 |
| Conread position: | 54-391 |
| Cow position: | chr29:565477-565770 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 56-216 |
| Cow position: | chr29:3104206-3104049 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 56-221 |
| Cow position: | chr29:3143749-3143586 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 161, 53 |
| Conread position: | 58-405 |
| Cow position: | chr29:22784786-22784441 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 50 |
| Conread position: | 60-263 |
| Cow position: | chr29:33648747-33648544 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 108, 49 |
| Conread position: | 62-249 |
| Cow position: | chr29:31650110-31649926 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 79, 47 |
| Conread position: | 62-405 |
| Cow position: | chr29:30207932-30208262 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 21 |
| Conread position: | 63-322 |
| Cow position: | chr29:4242577-4242326 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 24 |
| Conread position: | 63-397 |
| Cow position: | chr29:30241770-30241444 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 70-237 |
| Cow position: | chr29:25914660-25914823 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 134, 39 |
| Conread position: | 70-243 |
| Cow position: | chr29:3550666-3550498 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 73-393 |
| Cow position: | chr29:37071700-37071388 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 41 |
| Conread position: | 75-405 |
| Cow position: | chr29:10289473-10289800 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 34 |
| Conread position: | 90-262 |
| Cow position: | chr29:24045187-24045352 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 154, 19 |
| Conread position: | 90-292 |
| Cow position: | chr29:29165329-29165524 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 71 |
| Conread position: | 93-405 |
| Cow position: | chr29:40057567-40057893 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 152, 16 |
| Conread position: | 94-303 |
| Cow position: | chr29:10662328-10662127 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 112-344 |
| Cow position: | chr29:13560658-13560427 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 132, 49 |
| Conread position: | 113-403 |
| Cow position: | chr29:13501599-13501312 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 42 |
| Conread position: | 137-284 |
| Cow position: | chr29:4769571-4769716 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 152-349 |
| Cow position: | chr29:36176025-36175832 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 264-403 |
| Cow position: | chr29:33648284-33648150 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 134, 56 |
| Conread position: | 266-406 |
| Cow position: | chr29:24045593-24045729 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 268-402 |
| Cow position: | chr29:3550493-3550361 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
Show alignments to all cow chromosomes.