Cow genome map
| Conread name: | LyN1-MLN01H050003 |
| Conread position: | 5-394 |
| Cow position: | chr6:541413-541054 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 276 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 80, 27 |
| Conread position: | 6-239 |
| Cow position: | chr6:26222843-26222618 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 6-404 |
| Cow position: | chr6:18405414-18405795 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 7-261 |
| Cow position: | chr6:58621711-58621960 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 237, 25 |
| Conread position: | 7-284 |
| Cow position: | chr6:32921669-32921408 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 79, 30 |
| Conread position: | 7-406 |
| Cow position: | chr6:27903844-27904222 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 25 |
| Conread position: | 12-406 |
| Cow position: | chr6:8812736-8813131 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 36-370 |
| Cow position: | chr6:47866412-47866741 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 27 |
| Conread position: | 36-405 |
| Cow position: | chr6:1566024-1565682 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 18 |
| Conread position: | 36-406 |
| Cow position: | chr6:20397077-20396733 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 49, 27 |
| Conread position: | 47-405 |
| Cow position: | chr6:9518757-9519112 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 64 |
| Conread position: | 56-393 |
| Cow position: | chr6:11073254-11073584 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 53 |
| Conread position: | 56-406 |
| Cow position: | chr6:16440452-16440114 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 55 |
| Conread position: | 59-347 |
| Cow position: | chr6:48777912-48778182 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 185, 50 |
| Conread position: | 62-249 |
| Cow position: | chr6:41284348-41284530 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 126, 47 |
| Conread position: | 62-349 |
| Cow position: | chr6:45553403-45553119 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 183, 47 |
| Conread position: | 62-405 |
| Cow position: | chr6:15594403-15594076 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 68-349 |
| Cow position: | chr6:11097699-11097429 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 43 |
| Conread position: | 69-405 |
| Cow position: | chr6:11298989-11298662 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 40 |
| Conread position: | 75-406 |
| Cow position: | chr6:55022215-55022540 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 34 |
| Conread position: | 93-280 |
| Cow position: | chr6:38415345-38415166 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 151, 16 |
| Conread position: | 109-405 |
| Cow position: | chr6:59920320-59920596 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 46, 37 |
| Conread position: | 112-284 |
| Cow position: | chr6:2854193-2854026 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 132, 43 |
| Conread position: | 134-393 |
| Cow position: | chr6:48019445-48019195 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 178-406 |
| Cow position: | chr6:28596874-28597100 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 89 |
| Conread position: | 186-405 |
| Cow position: | chr6:41252150-41252368 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 59, 81 |
| Conread position: | 208-389 |
| Cow position: | chr6:5713681-5713863 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 36, 61 |
| Conread position: | 243-348 |
| Cow position: | chr6:247005-246901 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 265-405 |
| Cow position: | chr6:11097001-11097139 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 36 |
| Conread position: | 284-400 |
| Cow position: | chr6:47017937-47017823 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
Show alignments to all cow chromosomes.