Cow genome map
| Conread name: | LyN1-MLN01H050003 |
| Conread position: | 7-242 |
| Cow position: | chr9:9535767-9535993 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 175, 31 |
| Conread position: | 7-242 |
| Cow position: | chr9:9584453-9584229 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 175, 31 |
| Conread position: | 7-406 |
| Cow position: | chr9:6598983-6599373 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 25 |
| Conread position: | 12-405 |
| Cow position: | chr9:58397191-58397574 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 25 |
| Conread position: | 32-366 |
| Cow position: | chr9:50215408-50215091 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 36-256 |
| Cow position: | chr9:51888966-51889179 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 103, 33 |
| Conread position: | 36-260 |
| Cow position: | chr9:2604379-2604601 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 36-279 |
| Cow position: | chr9:44403675-44403439 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 52-406 |
| Cow position: | chr9:34174376-34174733 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 57 |
| Conread position: | 56-280 |
| Cow position: | chr9:49371227-49371004 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 59 |
| Conread position: | 56-405 |
| Cow position: | chr9:8759937-8760289 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 53 |
| Conread position: | 58-249 |
| Cow position: | chr9:39590429-39590616 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 186, 51 |
| Conread position: | 59-239 |
| Cow position: | chr9:54361069-54360896 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 62-262 |
| Cow position: | chr9:10726537-10726352 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 62-404 |
| Cow position: | chr9:20709354-20709017 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 48 |
| Conread position: | 64-405 |
| Cow position: | chr9:3497853-3497521 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 11 |
| Conread position: | 91-405 |
| Cow position: | chr9:13082544-13082839 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 229 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 93-405 |
| Cow position: | chr9:56283770-56284080 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 17 |
| Conread position: | 112-405 |
| Cow position: | chr9:49637659-49637929 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 117-329 |
| Cow position: | chr9:29097893-29097682 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 127, 38 |
| Conread position: | 138-409 |
| Cow position: | chr9:8863194-8863460 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 77, 11 |
| Conread position: | 189-348 |
| Cow position: | chr9:3439760-3439606 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 195-408 |
| Cow position: | chr9:9731086-9730875 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 111 |
| Conread position: | 207-407 |
| Cow position: | chr9:54454079-54453876 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 214-342 |
| Cow position: | chr9:42379373-42379245 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 30, 52 |
| Conread position: | 243-405 |
| Cow position: | chr9:45181360-45181199 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 247-405 |
| Cow position: | chr9:9537239-9537397 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 120, 18 |
| Conread position: | 264-405 |
| Cow position: | chr9:20766725-20766867 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 275-405 |
| Cow position: | chr9:51889247-51889374 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.