Cow genome map
| Conread name: | LyN2-AR048H04LN05LH02S |
| Conread position: | 1-134 |
| Cow position: | chr11:53452362-53452223 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-161 |
| Cow position: | chr11:17891894-17892058 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 91, 143 |
| Conread position: | 2-127 |
| Cow position: | chr11:31894260-31894391 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-129 |
| Cow position: | chr11:8828644-8828511 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 12 |
| Conread position: | 2-129 |
| Cow position: | chr11:72082692-72082825 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 2-134 |
| Cow position: | chr11:13122027-13121889 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-135 |
| Cow position: | chr11:12949959-12949822 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 2-140 |
| Cow position: | chr11:60137679-60137821 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 88, 58 |
| Conread position: | 2-160 |
| Cow position: | chr11:13306835-13306665 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-160 |
| Cow position: | chr11:16000913-16001084 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-160 |
| Cow position: | chr11:17151660-17151829 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 8 |
| Conread position: | 2-160 |
| Cow position: | chr11:65988212-65988379 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 84, 143 |
| Conread position: | 2-160 |
| Cow position: | chr11:75255393-75255558 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 2-161 |
| Cow position: | chr11:27681485-27681660 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 2-161 |
| Cow position: | chr11:52832737-52832567 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 2-181 |
| Cow position: | chr11:67236386-67236574 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 2-186 |
| Cow position: | chr11:51745337-51745526 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 88, 164 |
| Conread position: | 2-186 |
| Cow position: | chr11:53445762-53445955 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 88, 183 |
| Conread position: | 2-190 |
| Cow position: | chr11:13039188-13038997 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 106, 148 |
| Conread position: | 2-191 |
| Cow position: | chr11:17452221-17452412 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 140 |
| Conread position: | 2-191 |
| Cow position: | chr11:39808977-39809174 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-192 |
| Cow position: | chr11:9083461-9083655 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 116 |
| Conread position: | 2-194 |
| Cow position: | chr11:4609853-4609665 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 166, 81 |
| Conread position: | 2-195 |
| Cow position: | chr11:40275617-40275408 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 2-195 |
| Cow position: | chr11:40279109-40278900 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 2-195 |
| Cow position: | chr11:45889947-45890152 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-197 |
| Cow position: | chr11:34642245-34642040 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 88, 155 |
| Conread position: | 2-198 |
| Cow position: | chr11:81518188-81517984 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-199 |
| Cow position: | chr11:42519722-42519926 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 78 |
| Conread position: | 2-221 |
| Cow position: | chr11:23047776-23047540 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 3-159 |
| Cow position: | chr11:7001945-7001772 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 3-160 |
| Cow position: | chr11:2394099-2393933 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 87, 57 |
| Conread position: | 4-128 |
| Cow position: | chr11:46700001-46700129 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 52, 61 |
| Conread position: | 4-191 |
| Cow position: | chr11:76392032-76391839 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 169 |
| Conread position: | 6-160 |
| Cow position: | chr11:38667833-38667671 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 10-224 |
| Cow position: | chr11:53262761-53262976 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 109 |
| Conread position: | 22-129 |
| Cow position: | chr11:47565929-47565816 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 22-197 |
| Cow position: | chr11:373136-372950 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 68, 161 |
| Conread position: | 25-189 |
| Cow position: | chr11:34946060-34945885 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 65, 159 |
| Conread position: | 26-185 |
| Cow position: | chr11:6729680-6729852 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
Show alignments to all cow chromosomes.