Cow genome map
| Conread name: | LyN2-AR048H04LN05LH02S |
| Conread position: | 2-107 |
| Cow position: | chr3:58865491-58865383 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 88, 58 |
| Conread position: | 2-123 |
| Cow position: | chr3:1300197-1300324 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-129 |
| Cow position: | chr3:37452050-37452179 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 88, 113 |
| Conread position: | 2-134 |
| Cow position: | chr3:24538854-24538992 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-134 |
| Cow position: | chr3:25250885-25251024 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-134 |
| Cow position: | chr3:39911077-39910940 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-134 |
| Cow position: | chr3:58632544-58632681 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 88, 34 |
| Conread position: | 2-148 |
| Cow position: | chr3:5844901-5845053 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-155 |
| Cow position: | chr3:5419882-5419722 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-158 |
| Cow position: | chr3:52835906-52835731 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 2-159 |
| Cow position: | chr3:23111535-23111364 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 2-160 |
| Cow position: | chr3:9074368-9074194 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 2-160 |
| Cow position: | chr3:20092544-20092374 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-160 |
| Cow position: | chr3:22271473-22271305 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-160 |
| Cow position: | chr3:22953901-22953734 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 85, 55 |
| Conread position: | 2-160 |
| Cow position: | chr3:25091015-25091182 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 2-160 |
| Cow position: | chr3:31933118-31932954 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-160 |
| Cow position: | chr3:36100816-36100981 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 2-161 |
| Cow position: | chr3:61322822-61322989 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-181 |
| Cow position: | chr3:891246-891438 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 2-192 |
| Cow position: | chr3:58174886-58175081 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 105, 87 |
| Conread position: | 2-193 |
| Cow position: | chr3:64536583-64536395 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 84 |
| Conread position: | 2-197 |
| Cow position: | chr3:15221540-15221328 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 163 |
| Conread position: | 2-203 |
| Cow position: | chr3:41718374-41718583 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 85, 27 |
| Conread position: | 2-206 |
| Cow position: | chr3:25076189-25075974 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 30, 175 |
| Conread position: | 2-223 |
| Cow position: | chr3:55991887-55991652 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 3-160 |
| Cow position: | chr3:12255459-12255623 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 47 |
| Conread position: | 4-153 |
| Cow position: | chr3:10431584-10431744 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 83, 27 |
| Conread position: | 4-160 |
| Cow position: | chr3:8924025-8924192 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 86, 70 |
| Conread position: | 4-181 |
| Cow position: | chr3:74611547-74611735 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 86, 177 |
| Conread position: | 6-129 |
| Cow position: | chr3:51146685-51146557 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 6-274 |
| Cow position: | chr3:55373584-55373308 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 39, 137 |
| Conread position: | 16-181 |
| Cow position: | chr3:62628268-62628093 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 12 |
| Conread position: | 22-159 |
| Cow position: | chr3:7365669-7365528 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 52, 69 |
| Conread position: | 24-129 |
| Cow position: | chr3:22171381-22171488 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 25-160 |
| Cow position: | chr3:8746227-8746083 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 25-160 |
| Cow position: | chr3:26741027-26740889 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 41-160 |
| Cow position: | chr3:25027422-25027552 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
Show alignments to all cow chromosomes.