Cow genome map
| Conread name: | LyN2-AR048H04LN05LH02S |
| Conread position: | 1-159 |
| Cow position: | chr4:3267869-3267703 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 21, 107 |
| Conread position: | 1-159 |
| Cow position: | chr4:65406372-65406210 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 106, 77 |
| Conread position: | 1-160 |
| Cow position: | chr4:22249452-22249282 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-161 |
| Cow position: | chr4:51433403-51433579 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 2-122 |
| Cow position: | chr4:31172671-31172796 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 88, 58 |
| Conread position: | 2-127 |
| Cow position: | chr4:22528389-22528258 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-129 |
| Cow position: | chr4:5797960-5798097 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 2-134 |
| Cow position: | chr4:30131334-30131471 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 52 |
| Conread position: | 2-135 |
| Cow position: | chr4:48499816-48499953 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 37 |
| Conread position: | 2-157 |
| Cow position: | chr4:21365403-21365567 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 85, 58 |
| Conread position: | 2-160 |
| Cow position: | chr4:10992203-10992033 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-160 |
| Cow position: | chr4:12667355-12667205 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 89 |
| Conread position: | 2-160 |
| Cow position: | chr4:23758802-23758969 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 13 |
| Conread position: | 2-160 |
| Cow position: | chr4:24415560-24415721 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 90, 18 |
| Conread position: | 2-160 |
| Cow position: | chr4:40433908-40433738 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 2-160 |
| Cow position: | chr4:45919032-45919201 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 2-160 |
| Cow position: | chr4:50769773-50769599 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 2-173 |
| Cow position: | chr4:54146468-54146295 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 85, 42 |
| Conread position: | 2-176 |
| Cow position: | chr4:19307255-19307437 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 2-180 |
| Cow position: | chr4:65604475-65604288 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 21, 179 |
| Conread position: | 2-186 |
| Cow position: | chr4:17478301-17478112 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 80, 13 |
| Conread position: | 2-197 |
| Cow position: | chr4:35471316-35471512 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 88, 139 |
| Conread position: | 2-198 |
| Cow position: | chr4:53752520-53752722 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 88, 173 |
| Conread position: | 3-202 |
| Cow position: | chr4:24755560-24755774 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 67 |
| Conread position: | 4-126 |
| Cow position: | chr4:22115605-22115731 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 4-160 |
| Cow position: | chr4:1799906-1800073 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 4-160 |
| Cow position: | chr4:9547955-9548120 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 4-184 |
| Cow position: | chr4:20279324-20279514 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 4-195 |
| Cow position: | chr4:2121401-2121198 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 86, 170 |
| Conread position: | 6-127 |
| Cow position: | chr4:59719609-59719731 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 79, 8 |
| Conread position: | 6-186 |
| Cow position: | chr4:18439567-18439382 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 121 |
| Conread position: | 7-160 |
| Cow position: | chr4:23311261-23311102 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 103, 78 |
| Conread position: | 14-190 |
| Cow position: | chr4:63417691-63417503 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 16-185 |
| Cow position: | chr4:62411865-62412045 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 172 |
| Conread position: | 23-153 |
| Cow position: | chr4:7315232-7315375 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
Show alignments to all cow chromosomes.