Cow genome map
| Conread name: | LyN2-AR048H04LN05LH02S |
| Conread position: | 1-108 |
| Cow position: | chr6:38895068-38894957 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-160 |
| Cow position: | chr6:28164865-28165040 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 2-125 |
| Cow position: | chr6:54144348-54144477 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-128 |
| Cow position: | chr6:1008916-1009043 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 106, 77 |
| Conread position: | 2-129 |
| Cow position: | chr6:16733461-16733593 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 88, 52 |
| Conread position: | 2-129 |
| Cow position: | chr6:18582766-18582637 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 86, 19 |
| Conread position: | 2-134 |
| Cow position: | chr6:1890536-1890394 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 2-134 |
| Cow position: | chr6:29412743-29412605 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-134 |
| Cow position: | chr6:47858332-47858467 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-135 |
| Cow position: | chr6:18469184-18469049 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 2-144 |
| Cow position: | chr6:24557926-24558072 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 46 |
| Conread position: | 2-159 |
| Cow position: | chr6:43760407-43760568 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 2-160 |
| Cow position: | chr6:827662-827492 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-160 |
| Cow position: | chr6:6596617-6596781 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 2-173 |
| Cow position: | chr6:31425519-31425331 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 47, 12 |
| Conread position: | 2-194 |
| Cow position: | chr6:47192483-47192278 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 178 |
| Conread position: | 2-196 |
| Cow position: | chr6:4164125-4163921 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 80, 170 |
| Conread position: | 2-196 |
| Cow position: | chr6:37054031-37054235 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 2-206 |
| Cow position: | chr6:13718805-13719023 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 30, 176 |
| Conread position: | 3-186 |
| Cow position: | chr6:50034684-50034494 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 176 |
| Conread position: | 4-121 |
| Cow position: | chr6:47327025-47326909 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 4-180 |
| Cow position: | chr6:15997170-15996985 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 4-191 |
| Cow position: | chr6:30160366-30160562 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 86, 168 |
| Conread position: | 6-211 |
| Cow position: | chr6:9026569-9026767 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 84, 109 |
| Conread position: | 7-133 |
| Cow position: | chr6:10237384-10237516 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 8-139 |
| Cow position: | chr6:32798821-32798683 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 8-155 |
| Cow position: | chr6:19427502-19427656 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 15-160 |
| Cow position: | chr6:53264739-53264586 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 16-180 |
| Cow position: | chr6:47624822-47624651 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 71, 106 |
| Conread position: | 25-160 |
| Cow position: | chr6:36892262-36892129 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 114 |
| Conread position: | 29-163 |
| Cow position: | chr6:60423268-60423124 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
Show alignments to all cow chromosomes.