Cow genome map
| Conread name: | LyN2-AR048H04LN05LH02S |
| Conread position: | 1-160 |
| Cow position: | chr9:3169498-3169664 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-160 |
| Cow position: | chr9:36827724-36827554 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-160 |
| Cow position: | chr9:40007886-40007716 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 2-127 |
| Cow position: | chr9:11102775-11102907 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-127 |
| Cow position: | chr9:20839652-20839521 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-129 |
| Cow position: | chr9:41957830-41957697 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-134 |
| Cow position: | chr9:5172354-5172219 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 2-134 |
| Cow position: | chr9:7305852-7305718 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 90, 8 |
| Conread position: | 2-134 |
| Cow position: | chr9:14184689-14184556 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 105 |
| Conread position: | 2-134 |
| Cow position: | chr9:32847913-32847775 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-134 |
| Cow position: | chr9:34310052-34309914 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-134 |
| Cow position: | chr9:56861033-56860902 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 80, 17 |
| Conread position: | 2-134 |
| Cow position: | chr9:64007858-64007995 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 2-135 |
| Cow position: | chr9:34725486-34725625 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 50 |
| Conread position: | 2-141 |
| Cow position: | chr9:48773377-48773226 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 2-155 |
| Cow position: | chr9:15006726-15006888 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 2-155 |
| Cow position: | chr9:38927107-38926948 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 53, 76 |
| Conread position: | 2-155 |
| Cow position: | chr9:50827904-50828058 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 88, 42 |
| Conread position: | 2-159 |
| Cow position: | chr9:50522320-50522481 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 2-160 |
| Cow position: | chr9:18110842-18111007 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 88, 58 |
| Conread position: | 2-160 |
| Cow position: | chr9:49651750-49651585 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 85, 68 |
| Conread position: | 2-181 |
| Cow position: | chr9:19382354-19382164 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 2-185 |
| Cow position: | chr9:27292251-27292449 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 2-185 |
| Cow position: | chr9:35708595-35708789 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 88, 181 |
| Conread position: | 2-189 |
| Cow position: | chr9:21462842-21463032 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 130 |
| Conread position: | 2-190 |
| Cow position: | chr9:24837563-24837366 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 3-139 |
| Cow position: | chr9:34204156-34204009 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 3-160 |
| Cow position: | chr9:30020002-30019837 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 86, 57 |
| Conread position: | 4-129 |
| Cow position: | chr9:20668399-20668277 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 104, 49 |
| Conread position: | 4-159 |
| Cow position: | chr9:43926088-43926250 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 86, 100 |
| Conread position: | 4-160 |
| Cow position: | chr9:3845187-3845346 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 86, 55 |
| Conread position: | 4-160 |
| Cow position: | chr9:17110794-17110627 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 86, 11 |
| Conread position: | 4-210 |
| Cow position: | chr9:20039109-20039326 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 86, 162 |
| Conread position: | 6-195 |
| Cow position: | chr9:6203767-6203962 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 86, 166 |
| Conread position: | 7-181 |
| Cow position: | chr9:15033925-15033742 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 83, 34 |
| Conread position: | 10-194 |
| Cow position: | chr9:42173170-42173366 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 116 |
| Conread position: | 11-158 |
| Cow position: | chr9:33059256-33059416 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 25-160 |
| Cow position: | chr9:39428799-39428946 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
Show alignments to all cow chromosomes.