Cow genome map
| Conread name: | LyN2-AR048H04LN05LH02S |
| Conread position: | 1-159 |
| Cow position: | chrX:159728-159564 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 90, 142 |
| Conread position: | 2-88 |
| Cow position: | chrX:7345116-7345202 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 75 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-88 |
| Cow position: | chrX:20011440-20011526 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 77 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-116 |
| Cow position: | chrX:32743566-32743685 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-134 |
| Cow position: | chrX:16419179-16419317 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 2-135 |
| Cow position: | chrX:21640458-21640596 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 2-148 |
| Cow position: | chrX:43980768-43980919 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 88, 136 |
| Conread position: | 2-154 |
| Cow position: | chrX:16514233-16514078 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 129, 13 |
| Conread position: | 2-160 |
| Cow position: | chrX:9539355-9539522 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-160 |
| Cow position: | chrX:9839257-9839424 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-160 |
| Cow position: | chrX:19678239-19678077 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 2-160 |
| Cow position: | chrX:25338216-25338387 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 2-160 |
| Cow position: | chrX:25388209-25388049 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 2-160 |
| Cow position: | chrX:27287704-27287536 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-160 |
| Cow position: | chrX:34470748-34470913 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 88, 12 |
| Conread position: | 2-175 |
| Cow position: | chrX:7425498-7425683 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-179 |
| Cow position: | chrX:6563552-6563738 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 88, 183 |
| Conread position: | 2-185 |
| Cow position: | chrX:36840895-36841080 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 52, 140 |
| Conread position: | 2-197 |
| Cow position: | chrX:29874342-29874132 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 23, 173 |
| Conread position: | 2-197 |
| Cow position: | chrX:33802975-33802766 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 3-127 |
| Cow position: | chrX:17042712-17042846 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 4-138 |
| Cow position: | chrX:4446740-4446879 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 4-159 |
| Cow position: | chrX:7497273-7497435 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 4-199 |
| Cow position: | chrX:38999886-39000092 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 83, 28 |
| Conread position: | 15-134 |
| Cow position: | chrX:5046871-5046746 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 15-171 |
| Cow position: | chrX:2648166-2648003 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 25-160 |
| Cow position: | chrX:488734-488878 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 65, 48 |
| Conread position: | 25-160 |
| Cow position: | chrX:21664665-21664522 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 26-218 |
| Cow position: | chrX:17895873-17895676 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 149 |
Show alignments to all cow chromosomes.