Cow genome map
| Conread name: | LyN2-AR051E04LN05VE04S |
| Conread position: | 1-377 |
| Cow position: | chr13:39984487-39984863 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 45 |
| Conread position: | 1-425 |
| Cow position: | chr13:22125348-22125772 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 198, 204 |
| Conread position: | 1-425 |
| Cow position: | chr13:24163074-24163498 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 198, 204 |
| Conread position: | 1-428 |
| Cow position: | chr13:22125012-22125439 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 85, 74 |
| Conread position: | 1-428 |
| Cow position: | chr13:24162738-24163165 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 263 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 86, 79 |
| Conread position: | 1-431 |
| Cow position: | chr13:39930731-39931159 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 1-431 |
| Cow position: | chr13:39984235-39984665 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-432 |
| Cow position: | chr13:22124928-22125359 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 337, 322 |
| Conread position: | 1-432 |
| Cow position: | chr13:24162654-24163085 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 337, 322 |
| Conread position: | 1-437 |
| Cow position: | chr13:39984403-39984839 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-441 |
| Cow position: | chr13:39984319-39984759 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-446 |
| Cow position: | chr13:22124760-22125205 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 285 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 81, 68 |
| Conread position: | 1-446 |
| Cow position: | chr13:24162486-24162931 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 282 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 198, 204 |
| Conread position: | 1-446 |
| Cow position: | chr13:39930647-39931092 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 286 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 1-447 |
| Cow position: | chr13:22125264-22125710 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 1-447 |
| Cow position: | chr13:24162990-24163436 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 24-428 |
| Cow position: | chr13:24162845-24163249 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-442 |
| Cow position: | chr13:39984091-39984508 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 248 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-446 |
| Cow position: | chr13:39930587-39931008 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 90, 97 |
| Conread position: | 25-447 |
| Cow position: | chr13:39984175-39984597 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-428 |
| Cow position: | chr13:22125131-22125523 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-426 |
| Cow position: | chr13:22124712-22125101 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 383, 379 |
| Conread position: | 37-426 |
| Cow position: | chr13:24162438-24162827 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 280, 275 |
| Conread position: | 55-426 |
| Cow position: | chr13:56292145-56291776 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 151, 144 |
| Conread position: | 76-446 |
| Cow position: | chr13:39983974-39984344 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 96-446 |
| Cow position: | chr13:39930574-39930924 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 103, 109 |
| Conread position: | 121-447 |
| Cow position: | chr13:24162438-24162764 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 191, 196 |
| Conread position: | 148-447 |
| Cow position: | chr13:22124739-22125038 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 164, 169 |
| Conread position: | 180-447 |
| Cow position: | chr13:22124687-22124954 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 130, 137 |
| Conread position: | 180-447 |
| Cow position: | chr13:24162413-24162680 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.