Cow genome map
| Conread name: | LyN2-AR051E04LN05VE04S |
| Conread position: | 1-257 |
| Cow position: | chr19:14959566-14959310 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-262 |
| Cow position: | chr19:23597452-23597713 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-290 |
| Cow position: | chr19:20678374-20678663 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 150, 156 |
| Conread position: | 1-294 |
| Cow position: | chr19:20635378-20635085 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 76, 72 |
| Conread position: | 1-383 |
| Cow position: | chr19:14948380-14947998 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 218, 233 |
| Conread position: | 1-392 |
| Cow position: | chr19:23614695-23615086 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 134, 127 |
| Conread position: | 1-414 |
| Cow position: | chr19:14940663-14941076 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 302, 316 |
| Conread position: | 1-418 |
| Cow position: | chr19:14939991-14940408 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 311, 316 |
| Conread position: | 1-419 |
| Cow position: | chr19:23650061-23650479 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 232 |
| Conread position: | 1-423 |
| Cow position: | chr19:14960138-14959718 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 268 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 392, 322 |
| Conread position: | 1-425 |
| Cow position: | chr19:20635630-20635206 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 76, 67 |
| Conread position: | 1-427 |
| Cow position: | chr19:20635462-20635036 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 152, 127 |
| Conread position: | 1-428 |
| Cow position: | chr19:23597284-23597711 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-431 |
| Cow position: | chr19:14940579-14941009 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 316, 309 |
| Conread position: | 1-431 |
| Cow position: | chr19:20677786-20678216 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 399, 378 |
| Conread position: | 1-431 |
| Cow position: | chr19:20678038-20678468 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 148, 138 |
| Conread position: | 1-431 |
| Cow position: | chr19:23596951-23597378 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 1-431 |
| Cow position: | chr19:23613603-23614033 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 272 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 220, 230 |
| Conread position: | 1-431 |
| Cow position: | chr19:43570221-43569791 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 256 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 307, 302 |
| Conread position: | 1-432 |
| Cow position: | chr19:14940243-14940674 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-437 |
| Cow position: | chr19:23614611-23615047 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 290, 307 |
| Conread position: | 1-437 |
| Cow position: | chr19:23649473-23649909 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-437 |
| Cow position: | chr19:23649557-23649993 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 386, 400 |
| Conread position: | 1-437 |
| Cow position: | chr19:23649893-23650329 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 232 |
| Conread position: | 1-438 |
| Cow position: | chr19:23649305-23649742 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-438 |
| Cow position: | chr19:23649641-23650078 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-438 |
| Cow position: | chr19:23649725-23650162 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 385, 400 |
| Conread position: | 1-440 |
| Cow position: | chr19:23614527-23614966 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 135, 147 |
| Conread position: | 1-440 |
| Cow position: | chr19:43570137-43569700 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 125, 130 |
| Conread position: | 1-446 |
| Cow position: | chr19:14940159-14940604 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 281 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 220, 232 |
| Conread position: | 1-446 |
| Cow position: | chr19:14940327-14940772 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 315, 302 |
| Conread position: | 1-446 |
| Cow position: | chr19:20635546-20635101 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 152, 127 |
| Conread position: | 1-446 |
| Cow position: | chr19:23597116-23597561 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 273 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 135, 139 |
| Conread position: | 1-446 |
| Cow position: | chr19:23613351-23613796 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-446 |
| Cow position: | chr19:23613435-23613880 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 227, 232 |
| Conread position: | 1-446 |
| Cow position: | chr19:23613771-23614216 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 140, 135 |
| Conread position: | 1-446 |
| Cow position: | chr19:23614107-23614552 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-446 |
| Cow position: | chr19:23614191-23614636 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 388, 400 |
| Conread position: | 1-446 |
| Cow position: | chr19:23614275-23614720 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 64, 51 |
| Conread position: | 1-447 |
| Cow position: | chr19:23613687-23614133 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 282 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 317, 327 |
| Conread position: | 1-447 |
| Cow position: | chr19:23649389-23649835 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-437 |
| Cow position: | chr19:14948462-14948028 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 270 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 219, 59 |
| Conread position: | 2-438 |
| Cow position: | chr19:20677619-20678055 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 41 |
| Conread position: | 2-446 |
| Cow position: | chr19:14960387-14959945 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 0 |
| Conread position: | 3-433 |
| Cow position: | chr19:23614445-23614875 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 304 |
| Conread position: | 3-446 |
| Cow position: | chr19:23597202-23597645 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-446 |
| Cow position: | chr19:20677453-20677895 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 255 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 99, 103 |
| Conread position: | 4-446 |
| Cow position: | chr19:23649812-23650254 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 303 |
| Conread position: | 14-428 |
| Cow position: | chr19:14940424-14940838 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 262 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 302, 289 |
| Conread position: | 14-431 |
| Cow position: | chr19:20678219-20678636 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 253 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 120, 111 |
| Conread position: | 42-343 |
| Cow position: | chr19:14959120-14958819 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 113, 119 |
| Conread position: | 54-425 |
| Cow position: | chr19:14959679-14959310 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 64-438 |
| Cow position: | chr19:23649284-23649658 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 235 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 70-425 |
| Cow position: | chr19:14959254-14958905 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 70-438 |
| Cow position: | chr19:43570236-43569868 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 236, 225 |
| Conread position: | 70-446 |
| Cow position: | chr19:23596852-23597225 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 316, 183 |
| Conread position: | 76-370 |
| Cow position: | chr19:14959575-14959278 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 238, 220 |
| Conread position: | 78-433 |
| Cow position: | chr19:14948470-14948116 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 224 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 223, 66 |
| Conread position: | 82-446 |
| Cow position: | chr19:14939988-14940352 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 235 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 77, 70 |
| Conread position: | 161-446 |
| Cow position: | chr19:23649297-23649582 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 134, 140 |
Show alignments to all cow chromosomes.