Cow genome map
| Conread name: | LyN2-AR051E04LN05VE04S |
| Conread position: | 1-262 |
| Cow position: | chr22:12475548-12475287 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-262 |
| Cow position: | chr22:12499711-12499972 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-342 |
| Cow position: | chr22:11701354-11701695 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 62, 52 |
| Conread position: | 1-414 |
| Cow position: | chr22:12418858-12418445 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-418 |
| Cow position: | chr22:12399171-12398754 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 227, 232 |
| Conread position: | 1-422 |
| Cow position: | chr22:12385329-12384908 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-425 |
| Cow position: | chr22:12431403-12430979 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-425 |
| Cow position: | chr22:12431991-12431567 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-425 |
| Cow position: | chr22:46654266-46654690 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 131, 127 |
| Conread position: | 1-426 |
| Cow position: | chr22:12432243-12431818 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 195, 205 |
| Conread position: | 1-427 |
| Cow position: | chr22:12475716-12475290 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 266 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 303, 307 |
| Conread position: | 1-427 |
| Cow position: | chr22:12499543-12499969 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-428 |
| Cow position: | chr22:11666532-11666959 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 41, 46 |
| Conread position: | 1-428 |
| Cow position: | chr22:12476304-12475877 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-428 |
| Cow position: | chr22:46654182-46654609 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 258 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 50, 43 |
| Conread position: | 1-431 |
| Cow position: | chr22:11701186-11701616 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 46 |
| Conread position: | 1-431 |
| Cow position: | chr22:12399255-12398825 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 232 |
| Conread position: | 1-431 |
| Cow position: | chr22:12418942-12418512 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 293 |
| Conread position: | 1-431 |
| Cow position: | chr22:12419211-12418764 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 1-431 |
| Cow position: | chr22:12498955-12499385 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 267 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-433 |
| Cow position: | chr22:12499039-12499471 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-435 |
| Cow position: | chr22:11641027-11641461 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 148 |
| Conread position: | 1-437 |
| Cow position: | chr22:11640775-11641211 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 294 |
| Conread position: | 1-437 |
| Cow position: | chr22:12399423-12398987 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 278 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 43, 50 |
| Conread position: | 1-437 |
| Cow position: | chr22:12432327-12431891 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 160, 152 |
| Conread position: | 1-437 |
| Cow position: | chr22:12499375-12499811 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-438 |
| Cow position: | chr22:12399591-12399154 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 275 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 225, 232 |
| Conread position: | 1-438 |
| Cow position: | chr22:12475884-12475447 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-446 |
| Cow position: | chr22:12385499-12385052 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 276 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 35, 50 |
| Conread position: | 1-446 |
| Cow position: | chr22:12399339-12398894 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 360 |
| Conread position: | 1-446 |
| Cow position: | chr22:12399507-12399062 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 48, 34 |
| Conread position: | 1-446 |
| Cow position: | chr22:12431235-12430790 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 213, 232 |
| Conread position: | 1-446 |
| Cow position: | chr22:12431571-12431126 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-446 |
| Cow position: | chr22:12431739-12431294 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 275 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-446 |
| Cow position: | chr22:12432411-12431966 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 58 |
| Conread position: | 1-446 |
| Cow position: | chr22:12458523-12458078 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 374, 399 |
| Conread position: | 1-446 |
| Cow position: | chr22:12475800-12475355 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 273 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-446 |
| Cow position: | chr22:12476052-12475607 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-446 |
| Cow position: | chr22:12476136-12475691 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-446 |
| Cow position: | chr22:12476220-12475775 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-446 |
| Cow position: | chr22:12499123-12499568 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 322, 326 |
| Conread position: | 1-446 |
| Cow position: | chr22:12499207-12499652 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-446 |
| Cow position: | chr22:14429815-14430260 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 315, 294 |
| Conread position: | 1-446 |
| Cow position: | chr22:14429899-14430344 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 230, 220 |
| Conread position: | 1-447 |
| Cow position: | chr22:12431907-12431461 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 438, 442 |
| Conread position: | 1-447 |
| Cow position: | chr22:14430235-14430681 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 41 |
| Conread position: | 1-447 |
| Cow position: | chr22:46654098-46654544 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 280 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 131, 127 |
| Conread position: | 2-446 |
| Cow position: | chr22:12385666-12385220 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 271 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 196, 216 |
| Conread position: | 2-446 |
| Cow position: | chr22:12432494-12432050 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 271 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 134, 140 |
| Conread position: | 2-446 |
| Cow position: | chr22:12475967-12475523 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 230 |
| Conread position: | 2-446 |
| Cow position: | chr22:12476387-12475943 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-446 |
| Cow position: | chr22:12498872-12499316 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-446 |
| Cow position: | chr22:12499292-12499736 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 230 |
| Conread position: | 2-447 |
| Cow position: | chr22:11640692-11641137 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 292 |
| Conread position: | 3-437 |
| Cow position: | chr22:12399757-12399323 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 270 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 361, 383 |
| Conread position: | 3-446 |
| Cow position: | chr22:12458437-12457994 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 306, 290 |
| Conread position: | 4-425 |
| Cow position: | chr22:12458184-12457763 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 123, 136 |
| Conread position: | 4-437 |
| Cow position: | chr22:14429650-14430083 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-446 |
| Cow position: | chr22:12499462-12499904 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 273 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-446 |
| Cow position: | chr22:12432071-12431630 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 297, 289 |
| Conread position: | 6-351 |
| Cow position: | chr22:11666621-11666966 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 53, 47 |
| Conread position: | 6-426 |
| Cow position: | chr22:11701275-11701695 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 53, 47 |
| Conread position: | 10-431 |
| Cow position: | chr22:11666457-11666878 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 190, 210 |
| Conread position: | 10-446 |
| Cow position: | chr22:11701111-11701547 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 268 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 190, 197 |
| Conread position: | 14-446 |
| Cow position: | chr22:12419013-12418581 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 264 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-440 |
| Cow position: | chr22:12431799-12431384 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 330, 336 |
| Conread position: | 25-446 |
| Cow position: | chr22:11640631-11641052 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 264 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 174, 181 |
| Conread position: | 25-446 |
| Cow position: | chr22:12458583-12458162 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-446 |
| Cow position: | chr22:46654038-46654459 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 23, 19 |
| Conread position: | 69-446 |
| Cow position: | chr22:14429799-14430176 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 34, 41 |
| Conread position: | 70-433 |
| Cow position: | chr22:12458622-12458259 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-437 |
| Cow position: | chr22:14442117-14442481 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 327, 306 |
| Conread position: | 73-446 |
| Cow position: | chr22:46654002-46654375 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 59, 55 |
| Conread position: | 82-446 |
| Cow position: | chr22:12432498-12432134 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-428 |
| Cow position: | chr22:11640616-11640950 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 48, 56 |
| Conread position: | 94-446 |
| Cow position: | chr22:11666457-11666809 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 139, 124 |
Show alignments to all cow chromosomes.