Cow genome map
| Conread name: | LyN2-AR051E04LN05VE04S |
| Conread position: | 1-246 |
| Cow position: | chr23:25723958-25723713 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 138, 134 |
| Conread position: | 1-248 |
| Cow position: | chr23:24654118-24654365 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-262 |
| Cow position: | chr23:24639805-24640066 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-302 |
| Cow position: | chr23:25724042-25723741 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-321 |
| Cow position: | chr23:25698403-25698083 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 58, 46 |
| Conread position: | 1-342 |
| Cow position: | chr23:24546993-24546652 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-352 |
| Cow position: | chr23:24626393-24626744 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-386 |
| Cow position: | chr23:25698487-25698102 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 278, 271 |
| Conread position: | 1-387 |
| Cow position: | chr23:25626616-25627002 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-402 |
| Cow position: | chr23:24522567-24522166 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 311, 316 |
| Conread position: | 1-413 |
| Cow position: | chr23:25626535-25626944 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 50 |
| Conread position: | 1-415 |
| Cow position: | chr23:24626309-24626723 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 258 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-425 |
| Cow position: | chr23:24522814-24522395 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 225, 27 |
| Conread position: | 1-425 |
| Cow position: | chr23:24560553-24560129 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-428 |
| Cow position: | chr23:24639637-24640064 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 295 |
| Conread position: | 1-431 |
| Cow position: | chr23:24547329-24546899 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 267 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-432 |
| Cow position: | chr23:24535960-24535529 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 73, 58 |
| Conread position: | 1-435 |
| Cow position: | chr23:25660320-25660754 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-437 |
| Cow position: | chr23:24547245-24546809 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-446 |
| Cow position: | chr23:24547161-24546716 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 389, 399 |
| Conread position: | 1-446 |
| Cow position: | chr23:24560637-24560192 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 393, 400 |
| Conread position: | 1-446 |
| Cow position: | chr23:24560805-24560360 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 277 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 294, 306 |
| Conread position: | 1-446 |
| Cow position: | chr23:24560889-24560444 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 147 |
| Conread position: | 1-446 |
| Cow position: | chr23:24639301-24639746 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 80, 88 |
| Conread position: | 1-446 |
| Cow position: | chr23:24639469-24639914 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 44 |
| Conread position: | 1-446 |
| Cow position: | chr23:25626031-25626476 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 270 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-446 |
| Cow position: | chr23:25660236-25660681 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 270 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-446 |
| Cow position: | chr23:25698571-25698126 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 269 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 248, 263 |
| Conread position: | 1-447 |
| Cow position: | chr23:25660152-25660598 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 432, 436 |
| Conread position: | 2-321 |
| Cow position: | chr23:24535791-24535472 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-433 |
| Cow position: | chr23:24536041-24535612 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 269 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 132, 146 |
| Conread position: | 4-437 |
| Cow position: | chr23:24560718-24560285 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-446 |
| Cow position: | chr23:24639388-24639830 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 207 |
| Conread position: | 4-447 |
| Cow position: | chr23:25626454-25626894 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 276 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 304, 131 |
| Conread position: | 7-374 |
| Cow position: | chr23:25626121-25626488 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-296 |
| Cow position: | chr23:24654043-24654329 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-432 |
| Cow position: | chr23:24639226-24639648 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 254 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 155, 163 |
| Conread position: | 11-246 |
| Cow position: | chr23:25698309-25698074 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 115, 122 |
| Conread position: | 11-414 |
| Cow position: | chr23:25724116-25723713 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 20 |
| Conread position: | 16-426 |
| Cow position: | chr23:24535861-24535451 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-446 |
| Cow position: | chr23:24522708-24522290 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 202, 103 |
| Conread position: | 32-446 |
| Cow position: | chr23:25625979-25626392 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 73-446 |
| Cow position: | chr23:24560900-24560528 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 173, 5 |
| Conread position: | 82-432 |
| Cow position: | chr23:25724129-25723779 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 77, 70 |
| Conread position: | 84-446 |
| Cow position: | chr23:24547330-24546968 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 142, 149 |
| Conread position: | 159-446 |
| Cow position: | chr23:25660142-25660429 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 179-446 |
| Cow position: | chr23:25724116-25723849 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.