Cow genome map
| Conread name: | LyN2-AR051E04LN05VE04S |
| Conread position: | 1-383 |
| Cow position: | chr6:49341076-49341456 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 64, 50 |
| Conread position: | 1-425 |
| Cow position: | chr6:49429068-49429492 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 58 |
| Conread position: | 1-439 |
| Cow position: | chr6:49428648-49429086 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 132 |
| Conread position: | 1-439 |
| Cow position: | chr6:49428732-49429170 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 48 |
| Conread position: | 1-440 |
| Cow position: | chr6:49396377-49396816 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 354, 360 |
| Conread position: | 1-440 |
| Cow position: | chr6:49428984-49429423 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 147 |
| Conread position: | 1-446 |
| Cow position: | chr6:49340404-49340849 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 272 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-446 |
| Cow position: | chr6:49340488-49340933 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-446 |
| Cow position: | chr6:49340572-49341017 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 55, 50 |
| Conread position: | 1-446 |
| Cow position: | chr6:49340740-49341185 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 272 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 316, 311 |
| Conread position: | 1-446 |
| Cow position: | chr6:49340824-49341269 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 30 |
| Conread position: | 1-446 |
| Cow position: | chr6:49340908-49341353 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 275 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-446 |
| Cow position: | chr6:49362339-49362772 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 283 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 141, 147 |
| Conread position: | 1-446 |
| Cow position: | chr6:49428900-49429345 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 315 |
| Conread position: | 1-447 |
| Cow position: | chr6:49362099-49362533 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 271 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 125, 135 |
| Conread position: | 1-447 |
| Cow position: | chr6:49396293-49396739 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 278 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 154, 158 |
| Conread position: | 1-447 |
| Cow position: | chr6:49396461-49396907 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-447 |
| Cow position: | chr6:49428312-49428758 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 295 |
| Conread position: | 1-447 |
| Cow position: | chr6:49428396-49428842 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 148 |
| Conread position: | 1-447 |
| Cow position: | chr6:49428480-49428926 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 148 |
| Conread position: | 1-447 |
| Cow position: | chr6:49428564-49429010 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-447 |
| Cow position: | chr6:49428816-49429262 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 54 |
| Conread position: | 3-425 |
| Cow position: | chr6:49396547-49396969 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-440 |
| Cow position: | chr6:49396135-49396564 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 18-437 |
| Cow position: | chr6:49396226-49396645 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-447 |
| Cow position: | chr6:49428252-49428674 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 165 |
| Conread position: | 28-438 |
| Cow position: | chr6:49395906-49396310 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 237 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 325, 0 |
| Conread position: | 31-433 |
| Cow position: | chr6:49395825-49396227 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 71, 83 |
| Conread position: | 74-375 |
| Cow position: | chr6:49362328-49362629 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 233, 220 |
| Conread position: | 80-439 |
| Cow position: | chr6:49428222-49428582 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 69 |
| Conread position: | 126-447 |
| Cow position: | chr6:49428185-49428506 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 10, 35 |
Show alignments to all cow chromosomes.