Cow genome map
| Conread name: | LyN2-AR051E04LN05VE04S |
| Conread position: | 1-292 |
| Cow position: | chr7:11600767-11600476 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 130, 126 |
| Conread position: | 1-293 |
| Cow position: | chr7:8278100-8278392 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 156, 138 |
| Conread position: | 1-321 |
| Cow position: | chr7:42878604-42878284 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-330 |
| Cow position: | chr7:12293684-12294013 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 244, 234 |
| Conread position: | 1-370 |
| Cow position: | chr7:1014273-1014642 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 244, 234 |
| Conread position: | 1-385 |
| Cow position: | chr7:18390414-18390798 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-387 |
| Cow position: | chr7:42878688-42878302 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-425 |
| Cow position: | chr7:3180369-3180793 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 135, 147 |
| Conread position: | 1-425 |
| Cow position: | chr7:3180453-3180876 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 139 |
| Conread position: | 1-425 |
| Cow position: | chr7:18390330-18390754 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-428 |
| Cow position: | chr7:28846591-28847018 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 253 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 301, 293 |
| Conread position: | 1-428 |
| Cow position: | chr7:42878940-42878513 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 303, 307 |
| Conread position: | 1-431 |
| Cow position: | chr7:1014939-1015369 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 267 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 306, 286 |
| Conread position: | 1-431 |
| Cow position: | chr7:3180033-3180463 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-431 |
| Cow position: | chr7:3180201-3180631 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 393, 400 |
| Conread position: | 1-431 |
| Cow position: | chr7:18390246-18390676 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-431 |
| Cow position: | chr7:42878772-42878342 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 1-431 |
| Cow position: | chr7:42879108-42878678 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 311 |
| Conread position: | 1-433 |
| Cow position: | chr7:1015023-1015455 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 223, 202 |
| Conread position: | 1-437 |
| Cow position: | chr7:1014771-1015207 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-437 |
| Cow position: | chr7:3180285-3180721 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 270 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-437 |
| Cow position: | chr7:8325321-8325757 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 256 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 68, 44 |
| Conread position: | 1-437 |
| Cow position: | chr7:12293348-12293784 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 257 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 387, 400 |
| Conread position: | 1-446 |
| Cow position: | chr7:3179781-3180226 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-446 |
| Cow position: | chr7:3180117-3180562 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 305, 292 |
| Conread position: | 1-446 |
| Cow position: | chr7:8277764-8278209 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 102, 109 |
| Conread position: | 1-446 |
| Cow position: | chr7:11601103-11600658 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 42 |
| Conread position: | 1-446 |
| Cow position: | chr7:28846507-28846952 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 57, 74 |
| Conread position: | 1-446 |
| Cow position: | chr7:42878856-42878411 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 270 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 134, 126 |
| Conread position: | 1-447 |
| Cow position: | chr7:8277932-8278378 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 280 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 67, 49 |
| Conread position: | 4-446 |
| Cow position: | chr7:42879189-42878747 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 273 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 313, 308 |
| Conread position: | 7-447 |
| Cow position: | chr7:12293438-12293878 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 269 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-446 |
| Cow position: | chr7:3179705-3180142 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 275 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 292, 288 |
| Conread position: | 11-414 |
| Cow position: | chr7:12293610-12294013 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 303, 294 |
| Conread position: | 16-446 |
| Cow position: | chr7:1014702-1015132 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 270 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 26, 31 |
| Conread position: | 24-438 |
| Cow position: | chr7:12293287-12293701 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 271, 284 |
| Conread position: | 25-431 |
| Cow position: | chr7:42879252-42878846 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 292, 287 |
| Conread position: | 25-447 |
| Cow position: | chr7:28846447-28846869 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 49 |
| Conread position: | 31-446 |
| Cow position: | chr7:11601157-11600742 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 100, 96 |
| Conread position: | 56-431 |
| Cow position: | chr7:18390133-18390508 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 77-431 |
| Cow position: | chr7:42879284-42878930 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 240, 235 |
| Conread position: | 83-440 |
| Cow position: | chr7:18390078-18390433 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 51, 29 |
| Conread position: | 109-447 |
| Cow position: | chr7:28846447-28846785 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 175-428 |
| Cow position: | chr7:12293270-12293523 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 52, 58 |
Show alignments to all cow chromosomes.