Cow genome map

Conread name: LyN2-AR060E02LN05AFE02F

Conread position: 1-303
Cow position: chr10:30450386-30450085 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 74, 111

Conread position: 3-259
Cow position: chr10:65791515-65791767 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 130

Conread position: 7-189
Cow position: chr10:5886569-5886756 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 64, 0

Conread position: 9-303
Cow position: chr10:22652373-22652678 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 67, 283

Conread position: 17-303
Cow position: chr10:58399588-58399303 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 175, 71

Conread position: 19-306
Cow position: chr10:20110242-20109960 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 123, 60

Conread position: 21-279
Cow position: chr10:9576347-9576084 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 57, 47

Conread position: 24-268
Cow position: chr10:15872170-15871929 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 120

Conread position: 27-292
Cow position: chr10:40645636-40645895 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 129, 24

Conread position: 29-257
Cow position: chr10:59675907-59675674 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 49, 215

Conread position: 29-270
Cow position: chr10:68251276-68251519 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 16, 49

Conread position: 32-298
Cow position: chr10:9342036-9341757 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 33-291
Cow position: chr10:55011843-55012109 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 206

Conread position: 33-293
Cow position: chr10:10753350-10753093 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 50, 104

Conread position: 33-303
Cow position: chr10:39081097-39081376 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 45, 232

Conread position: 34-302
Cow position: chr10:41985183-41984910 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 170

Conread position: 35-306
Cow position: chr10:23949216-23948938 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 40, 146

Conread position: 37-303
Cow position: chr10:10124051-10124322 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 38, 200

Conread position: 38-295
Cow position: chr10:8077444-8077176 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 262

Conread position: 39-257
Cow position: chr10:28933451-28933676 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 39, 76

Conread position: 39-257
Cow position: chr10:32503160-32503382 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 39-262
Cow position: chr10:13368060-13368289 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 39-264
Cow position: chr10:64182160-64182392 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 39-273
Cow position: chr10:16598398-16598634 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 41, 163

Conread position: 39-294
Cow position: chr10:67144303-67144561 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 109

Conread position: 39-303
Cow position: chr10:15115325-15115591 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 32, 158

Conread position: 39-306
Cow position: chr10:35975269-35975532 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 158

Conread position: 39-391
Cow position: chr10:2293013-2292674 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 39, 193

Conread position: 40-257
Cow position: chr10:28721501-28721713 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 117

Conread position: 40-269
Cow position: chr10:51779319-51779092 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 124

Conread position: 40-303
Cow position: chr10:25478815-25479083 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 59

Conread position: 40-303
Cow position: chr10:36231697-36231953 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 61

Conread position: 40-308
Cow position: chr10:64596137-64596412 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 22, 199

Conread position: 41-292
Cow position: chr10:51925131-51925393 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 43, 248

Conread position: 42-303
Cow position: chr10:31855045-31855311 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 115, 25

Conread position: 42-391
Cow position: chr10:1056199-1055841 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 218

Conread position: 42-396
Cow position: chr10:25353992-25354337 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 103

Conread position: 43-259
Cow position: chr10:57458432-57458653 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 177

Conread position: 43-264
Cow position: chr10:45370772-45370995 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 116, 5

Conread position: 43-269
Cow position: chr10:38725373-38725604 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 35, 115

Conread position: 45-263
Cow position: chr10:46491314-46491097 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 150, 110

Conread position: 45-281
Cow position: chr10:27576194-27576426 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 154, 71

Conread position: 45-303
Cow position: chr10:21424969-21424697 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 45-303
Cow position: chr10:62516590-62516860 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 0

Conread position: 45-391
Cow position: chr10:33067448-33067115 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 31

Conread position: 47-261
Cow position: chr10:24752875-24753087 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 146, 0

Conread position: 47-269
Cow position: chr10:2394745-2394521 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 29, 179

Conread position: 47-270
Cow position: chr10:24308179-24307969 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 152, 30

Conread position: 47-280
Cow position: chr10:46468976-46468725 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 56

Conread position: 47-294
Cow position: chr10:6012316-6012065 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 29, 72

Conread position: 47-301
Cow position: chr10:52046583-52046841 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 101, 30

Conread position: 47-302
Cow position: chr10:10720959-10720696 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 222

Conread position: 47-302
Cow position: chr10:33002522-33002262 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 15, 132

Conread position: 47-314
Cow position: chr10:20568853-20569128 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 76, 239

Conread position: 48-240
Cow position: chr10:28835949-28836138 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 45

Conread position: 48-267
Cow position: chr10:24755707-24755481 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 48-270
Cow position: chr10:3998627-3998849 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 113, 19

Conread position: 48-281
Cow position: chr10:23506769-23506534 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 150

Conread position: 48-291
Cow position: chr10:50776422-50776675 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 28, 43

Conread position: 48-294
Cow position: chr10:49568922-49569173 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 156

Conread position: 48-308
Cow position: chr10:13311450-13311718 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 30, 166

Conread position: 48-308
Cow position: chr10:29339675-29339405 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 30

Conread position: 51-264
Cow position: chr10:33891366-33891144 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 51-280
Cow position: chr10:13391332-13391093 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 207

Conread position: 51-284
Cow position: chr10:42453859-42454089 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 143

Conread position: 51-302
Cow position: chr10:24785826-24786085 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 27, 58

Conread position: 51-303
Cow position: chr10:11032776-11032513 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 43

Conread position: 51-303
Cow position: chr10:28039210-28038956 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 86

Conread position: 51-310
Cow position: chr10:19704781-19704528 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 89

Conread position: 51-382
Cow position: chr10:3180898-3180572 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 173

Conread position: 53-257
Cow position: chr10:5543527-5543314 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 53-275
Cow position: chr10:21657144-21657373 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 154

Conread position: 53-303
Cow position: chr10:60358457-60358704 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 12, 144

Conread position: 56-308
Cow position: chr10:19591038-19590780 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 157

Conread position: 58-269
Cow position: chr10:28105344-28105138 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 80

Conread position: 58-296
Cow position: chr10:59153907-59153680 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 98, 18

Conread position: 60-301
Cow position: chr10:8413320-8413075 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 18, 51

Conread position: 66-294
Cow position: chr10:6491036-6490795 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 236

Conread position: 66-303
Cow position: chr10:14787800-14787571 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 76

Conread position: 68-204
Cow position: chr10:54811192-54811335 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 9

Conread position: 68-303
Cow position: chr10:11059941-11060178 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 88, 164

Conread position: 69-303
Cow position: chr10:20517004-20517249 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 78, 0

Conread position: 70-223
Cow position: chr10:46066886-46067037 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 131, 71

Conread position: 70-274
Cow position: chr10:9445271-9445063 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 92, 132

Conread position: 70-281
Cow position: chr10:48257537-48257323 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 78, 45

Conread position: 89-303
Cow position: chr10:6038574-6038356 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 62, 111

Conread position: 89-306
Cow position: chr10:45606666-45606445 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 62, 29

Conread position: 89-389
Cow position: chr10:30497401-30497686 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 106, 66

Conread position: 97-283
Cow position: chr10:38739321-38739504 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 123

Conread position: 101-303
Cow position: chr10:52589919-52589711 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 105-294
Cow position: chr10:38429771-38429576 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 121

Conread position: 119-263
Cow position: chr10:17927932-17928081 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 123-303
Cow position: chr10:50044851-50044668 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 27

Conread position: 150-303
Cow position: chr10:51221243-51221084 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 208-404
Cow position: chr10:46675534-46675729 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 102

Show alignments to all cow chromosomes.