Cow genome map
| Conread name: | LyN2-AR060E02LN05AFE02F |
| Conread position: | 13-297 |
| Cow position: | chr12:35354444-35354748 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 64, 228 |
| Conread position: | 29-270 |
| Cow position: | chr12:16543883-16543644 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 47, 136 |
| Conread position: | 34-307 |
| Cow position: | chr12:30688028-30688308 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 38, 150 |
| Conread position: | 35-303 |
| Cow position: | chr12:18769385-18769107 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 37-257 |
| Cow position: | chr12:47928907-47929132 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 40, 168 |
| Conread position: | 37-269 |
| Cow position: | chr12:15622763-15622514 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 38-303 |
| Cow position: | chr12:20312472-20312207 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 40, 149 |
| Conread position: | 39-197 |
| Cow position: | chr12:18937082-18937248 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 39-257 |
| Cow position: | chr12:36012913-36012696 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 39, 181 |
| Conread position: | 39-267 |
| Cow position: | chr12:44905332-44905572 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 192 |
| Conread position: | 39-269 |
| Cow position: | chr12:1773968-1773734 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 137, 37 |
| Conread position: | 39-269 |
| Cow position: | chr12:19869166-19869399 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 231 |
| Conread position: | 39-273 |
| Cow position: | chr12:10461701-10461934 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 55 |
| Conread position: | 39-273 |
| Cow position: | chr12:39486125-39486362 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 153 |
| Conread position: | 39-286 |
| Cow position: | chr12:35807371-35807629 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 39, 151 |
| Conread position: | 39-306 |
| Cow position: | chr12:27039071-27038787 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 39-307 |
| Cow position: | chr12:17472525-17472257 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 107 |
| Conread position: | 40-289 |
| Cow position: | chr12:5146529-5146768 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 25 |
| Conread position: | 41-215 |
| Cow position: | chr12:10462203-10462380 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 163 |
| Conread position: | 41-268 |
| Cow position: | chr12:20479615-20479399 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 161, 109 |
| Conread position: | 43-303 |
| Cow position: | chr12:39753560-39753828 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 33, 188 |
| Conread position: | 45-197 |
| Cow position: | chr12:15938566-15938417 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 33, 92 |
| Conread position: | 45-294 |
| Cow position: | chr12:27055309-27055562 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 58 |
| Conread position: | 45-303 |
| Cow position: | chr12:1223641-1223377 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 47-268 |
| Cow position: | chr12:3212027-3212258 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 47-273 |
| Cow position: | chr12:24755321-24755099 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 47 |
| Conread position: | 48-270 |
| Cow position: | chr12:18081839-18081618 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 30, 95 |
| Conread position: | 48-303 |
| Cow position: | chr12:24559056-24559321 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 19, 194 |
| Conread position: | 51-278 |
| Cow position: | chr12:245983-245750 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 27, 72 |
| Conread position: | 51-303 |
| Cow position: | chr12:21828791-21829050 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 27, 176 |
| Conread position: | 51-307 |
| Cow position: | chr12:31198475-31198734 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 27, 43 |
| Conread position: | 54-293 |
| Cow position: | chr12:3757327-3757088 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 23, 87 |
| Conread position: | 55-308 |
| Cow position: | chr12:16851298-16851038 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 59-308 |
| Cow position: | chr12:37733062-37732813 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 14, 59 |
| Conread position: | 62-303 |
| Cow position: | chr12:5797826-5797593 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 17, 117 |
| Conread position: | 63-375 |
| Cow position: | chr12:18417286-18417606 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 85, 22 |
| Conread position: | 64-303 |
| Cow position: | chr12:28559018-28559262 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 84, 13 |
| Conread position: | 70-303 |
| Cow position: | chr12:48405857-48406082 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 89-251 |
| Cow position: | chr12:30064691-30064861 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 89-303 |
| Cow position: | chr12:1487784-1488009 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 58, 189 |
| Conread position: | 112-396 |
| Cow position: | chr12:6117670-6117956 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 196 |
| Conread position: | 121-271 |
| Cow position: | chr12:21862005-21861852 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 74, 41 |
| Conread position: | 179-400 |
| Cow position: | chr12:41093984-41093771 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 23 |
Show alignments to all cow chromosomes.