Cow genome map

Conread name: LyN2-AR060E02LN05AFE02F

Conread position: 1-303
Cow position: chr13:6621308-6621608 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 77, 204

Conread position: 13-257
Cow position: chr13:52879688-52879440 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 133, 212

Conread position: 13-284
Cow position: chr13:24280526-24280247 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 77, 68

Conread position: 13-380
Cow position: chr13:24822496-24822859 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 50

Conread position: 17-402
Cow position: chr13:7262668-7262281 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 250

Conread position: 18-290
Cow position: chr13:4604564-4604288 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 120, 58

Conread position: 18-308
Cow position: chr13:9665348-9665038 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 60, 273

Conread position: 21-288
Cow position: chr13:33517655-33517924 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 57, 14

Conread position: 21-303
Cow position: chr13:33631390-33631111 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 184

Conread position: 29-190
Cow position: chr13:29671179-29671342 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 127, 0

Conread position: 29-306
Cow position: chr13:29631114-29630835 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 118, 58

Conread position: 31-262
Cow position: chr13:25261547-25261787 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 33-257
Cow position: chr13:24767664-24767413 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 33-403
Cow position: chr13:14227185-14226814 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 182

Conread position: 34-294
Cow position: chr13:16343943-16343676 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 44, 68

Conread position: 34-396
Cow position: chr13:14378243-14377873 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 129

Conread position: 37-269
Cow position: chr13:46501558-46501316 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 43, 0

Conread position: 37-303
Cow position: chr13:34995072-34995343 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 41, 172

Conread position: 37-306
Cow position: chr13:46284363-46284637 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 28, 127

Conread position: 38-271
Cow position: chr13:47502468-47502710 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 164

Conread position: 38-290
Cow position: chr13:6759537-6759800 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 40, 62

Conread position: 38-293
Cow position: chr13:4208564-4208825 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 107, 41

Conread position: 39-264
Cow position: chr13:33256748-33256522 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 157

Conread position: 39-270
Cow position: chr13:6945625-6945381 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 41, 0

Conread position: 39-278
Cow position: chr13:20863769-20864007 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 153
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 109, 42

Conread position: 39-278
Cow position: chr13:25434877-25435112 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 39, 107

Conread position: 39-286
Cow position: chr13:25531540-25531788 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 122, 28

Conread position: 39-293
Cow position: chr13:17886753-17886499 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 137

Conread position: 39-294
Cow position: chr13:33282265-33281997 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 37, 246

Conread position: 39-315
Cow position: chr13:23265981-23265704 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 193
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 39, 123

Conread position: 40-264
Cow position: chr13:21276106-21275878 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 186

Conread position: 41-264
Cow position: chr13:661385-661621 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 90, 37

Conread position: 41-268
Cow position: chr13:21176074-21176305 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 154
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 40, 36

Conread position: 42-269
Cow position: chr13:44323152-44322921 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 164

Conread position: 42-278
Cow position: chr13:8201236-8201474 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 39, 193

Conread position: 43-242
Cow position: chr13:37497510-37497706 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 145, 110

Conread position: 43-246
Cow position: chr13:41359997-41359784 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 43-268
Cow position: chr13:24715485-24715260 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 164, 34

Conread position: 43-274
Cow position: chr13:32717623-32717864 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 43-305
Cow position: chr13:19393535-19393273 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 172
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 158

Conread position: 45-268
Cow position: chr13:61976719-61976946 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 159

Conread position: 45-274
Cow position: chr13:18244102-18243872 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 101

Conread position: 45-293
Cow position: chr13:9125919-9125658 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 31, 66

Conread position: 45-372
Cow position: chr13:1767013-1766697 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 23

Conread position: 46-280
Cow position: chr13:21241847-21242077 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 162
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 34, 159

Conread position: 46-292
Cow position: chr13:60487211-60487471 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 32, 0

Conread position: 47-260
Cow position: chr13:17994170-17993954 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 31, 105

Conread position: 47-269
Cow position: chr13:21235441-21235668 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 219

Conread position: 47-273
Cow position: chr13:47863455-47863688 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 31, 191

Conread position: 47-291
Cow position: chr13:24539739-24539483 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 29, 0

Conread position: 47-302
Cow position: chr13:8838750-8839005 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 157

Conread position: 47-303
Cow position: chr13:9803301-9803047 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 151, 34

Conread position: 48-268
Cow position: chr13:55843727-55843496 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 48-273
Cow position: chr13:20705960-20706195 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 157
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 23, 159

Conread position: 51-257
Cow position: chr13:7076496-7076286 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 152

Conread position: 51-273
Cow position: chr13:33875902-33875678 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 136

Conread position: 51-295
Cow position: chr13:32773602-32773345 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 105

Conread position: 51-303
Cow position: chr13:30510301-30510040 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 27, 150

Conread position: 53-264
Cow position: chr13:46458856-46458643 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 103, 13

Conread position: 53-264
Cow position: chr13:46985251-46985037 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 110

Conread position: 53-279
Cow position: chr13:15869357-15869129 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 25, 69

Conread position: 53-336
Cow position: chr13:8607281-8607570 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 45

Conread position: 54-268
Cow position: chr13:43184635-43184854 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 149
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 124

Conread position: 55-296
Cow position: chr13:11834249-11834490 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 40

Conread position: 55-308
Cow position: chr13:2462995-2463256 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 166
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 132, 0

Conread position: 59-269
Cow position: chr13:47963969-47964178 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 57

Conread position: 59-303
Cow position: chr13:54095036-54094794 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 132, 97

Conread position: 60-286
Cow position: chr13:14220701-14220487 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 92

Conread position: 60-303
Cow position: chr13:11767810-11768060 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 18, 0

Conread position: 61-267
Cow position: chr13:50823326-50823533 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 17, 33

Conread position: 61-279
Cow position: chr13:23444580-23444809 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 69

Conread position: 62-281
Cow position: chr13:38691314-38691541 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 86, 16

Conread position: 62-302
Cow position: chr13:20649754-20650001 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 8, 93

Conread position: 66-303
Cow position: chr13:35718909-35719158 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 189
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 12, 176

Conread position: 70-303
Cow position: chr13:17347026-17346790 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 78, 188

Conread position: 70-303
Cow position: chr13:20839786-20839550 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 136

Conread position: 77-292
Cow position: chr13:8245120-8245339 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 80, 146

Conread position: 88-264
Cow position: chr13:2302637-2302820 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 22

Conread position: 89-303
Cow position: chr13:4423280-4423505 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 42

Conread position: 92-294
Cow position: chr13:34761868-34761669 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 24, 60

Conread position: 110-285
Cow position: chr13:46430122-46430304 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 115-365
Cow position: chr13:39699977-39699730 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 18

Conread position: 123-303
Cow position: chr13:34118135-34118322 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 33, 152

Conread position: 130-279
Cow position: chr13:54864875-54865024 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 65, 88

Conread position: 135-297
Cow position: chr13:50739320-50739155 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 21, 135

Conread position: 150-402
Cow position: chr13:548639-548385 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 45, 69

Conread position: 167-401
Cow position: chr13:19108041-19107806 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 28, 135

Show alignments to all cow chromosomes.