Cow genome map
| Conread name: | LyN2-AR060E02LN05AFE02F |
| Conread position: | 1-271 |
| Cow position: | chr14:23107674-23107399 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 77, 95 |
| Conread position: | 1-302 |
| Cow position: | chr14:26108989-26108674 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 21, 187 |
| Conread position: | 8-246 |
| Cow position: | chr14:12856935-12856697 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 68, 41 |
| Conread position: | 13-271 |
| Cow position: | chr14:3588117-3588371 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 129, 64 |
| Conread position: | 19-297 |
| Cow position: | chr14:24837635-24837903 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 139, 35 |
| Conread position: | 24-197 |
| Cow position: | chr14:28605501-28605320 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 49, 63 |
| Conread position: | 25-319 |
| Cow position: | chr14:18238463-18238165 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 65, 110 |
| Conread position: | 27-272 |
| Cow position: | chr14:43565580-43565831 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 130, 210 |
| Conread position: | 31-303 |
| Cow position: | chr14:25385574-25385846 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 45, 175 |
| Conread position: | 31-303 |
| Cow position: | chr14:38355501-38355224 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 38, 87 |
| Conread position: | 32-303 |
| Cow position: | chr14:27312741-27312464 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 33-301 |
| Cow position: | chr14:34163563-34163832 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 123, 34 |
| Conread position: | 35-303 |
| Cow position: | chr14:10090870-10090593 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 36-273 |
| Cow position: | chr14:9254997-9255231 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 180, 43 |
| Conread position: | 37-302 |
| Cow position: | chr14:40721620-40721879 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 120, 26 |
| Conread position: | 39-267 |
| Cow position: | chr14:18309000-18309222 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 23, 119 |
| Conread position: | 39-269 |
| Cow position: | chr14:28988001-28987768 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 97 |
| Conread position: | 39-278 |
| Cow position: | chr14:18904298-18904546 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 39, 170 |
| Conread position: | 39-281 |
| Cow position: | chr14:19222189-19221942 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 118, 70 |
| Conread position: | 39-303 |
| Cow position: | chr14:7582131-7582413 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 41-303 |
| Cow position: | chr14:31785281-31785005 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 107, 36 |
| Conread position: | 45-303 |
| Cow position: | chr14:18448703-18448972 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 28, 256 |
| Conread position: | 45-303 |
| Cow position: | chr14:21018415-21018150 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 45-305 |
| Cow position: | chr14:10907021-10906753 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 33, 62 |
| Conread position: | 45-308 |
| Cow position: | chr14:45605393-45605124 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 33, 158 |
| Conread position: | 46-303 |
| Cow position: | chr14:21690979-21691235 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 47-264 |
| Cow position: | chr14:20069220-20069438 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 47-268 |
| Cow position: | chr14:24992114-24991897 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 47-271 |
| Cow position: | chr14:12488400-12488628 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 47-281 |
| Cow position: | chr14:47138496-47138740 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 14, 240 |
| Conread position: | 47-303 |
| Cow position: | chr14:34221356-34221094 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 190 |
| Conread position: | 47-307 |
| Cow position: | chr14:19814257-19814507 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 47-307 |
| Cow position: | chr14:24237120-24236862 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 80, 30 |
| Conread position: | 47-402 |
| Cow position: | chr14:35711878-35712236 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 70 |
| Conread position: | 48-268 |
| Cow position: | chr14:39807158-39807384 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 30, 159 |
| Conread position: | 48-306 |
| Cow position: | chr14:39877311-39877558 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 153, 29 |
| Conread position: | 51-281 |
| Cow position: | chr14:36440200-36439973 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 110, 26 |
| Conread position: | 51-291 |
| Cow position: | chr14:46751971-46751729 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 106, 25 |
| Conread position: | 51-303 |
| Cow position: | chr14:26449046-26448788 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 27, 177 |
| Conread position: | 51-305 |
| Cow position: | chr14:19863143-19863394 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 91 |
| Conread position: | 54-293 |
| Cow position: | chr14:724606-724363 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 24, 145 |
| Conread position: | 54-293 |
| Cow position: | chr14:1554042-1553799 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 24, 145 |
| Conread position: | 54-303 |
| Cow position: | chr14:31888411-31888664 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 151 |
| Conread position: | 54-306 |
| Cow position: | chr14:37624193-37624450 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 56-303 |
| Cow position: | chr14:24797287-24797537 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 135, 21 |
| Conread position: | 58-297 |
| Cow position: | chr14:46962829-46962584 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 90, 221 |
| Conread position: | 58-303 |
| Cow position: | chr14:37678707-37678963 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 61-284 |
| Cow position: | chr14:283476-283687 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 90, 16 |
| Conread position: | 63-398 |
| Cow position: | chr14:4731587-4731245 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 15, 238 |
| Conread position: | 70-269 |
| Cow position: | chr14:25362623-25362419 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 11 |
| Conread position: | 70-293 |
| Cow position: | chr14:25378214-25378445 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 78, 200 |
| Conread position: | 70-303 |
| Cow position: | chr14:17841010-17841251 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 60 |
| Conread position: | 72-283 |
| Cow position: | chr14:11614947-11615160 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 89-306 |
| Cow position: | chr14:14222033-14221807 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 68, 191 |
| Conread position: | 97-273 |
| Cow position: | chr14:31479104-31479280 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 63, 110 |
| Conread position: | 102-303 |
| Cow position: | chr14:14182587-14182385 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 89, 98 |
| Conread position: | 103-303 |
| Cow position: | chr14:26628080-26627872 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 20 |
| Conread position: | 118-291 |
| Cow position: | chr14:33337250-33337431 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 90 |
| Conread position: | 133-290 |
| Cow position: | chr14:41654186-41654348 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 273-398 |
| Cow position: | chr14:11818098-11817974 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 44, 60 |
Show alignments to all cow chromosomes.