Cow genome map
| Conread name: | LyN2-AR060E02LN05AFE02F |
| Conread position: | 1-297 |
| Cow position: | chr15:6491195-6491499 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 240 |
| Conread position: | 3-279 |
| Cow position: | chr15:31544956-31545243 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 19-267 |
| Cow position: | chr15:23767889-23768137 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 183 |
| Conread position: | 19-274 |
| Cow position: | chr15:1298112-1297853 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 56, 245 |
| Conread position: | 19-284 |
| Cow position: | chr15:19813026-19812753 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 59, 105 |
| Conread position: | 25-269 |
| Cow position: | chr15:9642803-9642549 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 77 |
| Conread position: | 25-273 |
| Cow position: | chr15:53118690-53118437 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 25-288 |
| Cow position: | chr15:45323153-45322887 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 54, 208 |
| Conread position: | 27-197 |
| Cow position: | chr15:31085902-31085728 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 138 |
| Conread position: | 30-297 |
| Cow position: | chr15:39894943-39894679 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 86 |
| Conread position: | 30-306 |
| Cow position: | chr15:14322698-14322973 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 48, 169 |
| Conread position: | 33-263 |
| Cow position: | chr15:6282576-6282806 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 38, 53 |
| Conread position: | 33-270 |
| Cow position: | chr15:12316286-12316046 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 45, 156 |
| Conread position: | 33-303 |
| Cow position: | chr15:31616642-31616919 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 180 |
| Conread position: | 37-264 |
| Cow position: | chr15:16741678-16741913 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 40, 173 |
| Conread position: | 38-337 |
| Cow position: | chr15:4373832-4373526 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 41, 178 |
| Conread position: | 39-269 |
| Cow position: | chr15:20370111-20370337 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 152, 39 |
| Conread position: | 39-282 |
| Cow position: | chr15:29272547-29272298 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 41, 239 |
| Conread position: | 39-303 |
| Cow position: | chr15:43248415-43248687 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 39-306 |
| Cow position: | chr15:27862972-27863242 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 90, 19 |
| Conread position: | 40-264 |
| Cow position: | chr15:49738692-49738921 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 41-215 |
| Cow position: | chr15:22607161-22606983 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 41-269 |
| Cow position: | chr15:40009296-40009531 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 37, 164 |
| Conread position: | 42-202 |
| Cow position: | chr15:29861713-29861546 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 34, 60 |
| Conread position: | 42-288 |
| Cow position: | chr15:33681001-33680752 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 36, 153 |
| Conread position: | 43-252 |
| Cow position: | chr15:23139810-23140017 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 73, 30 |
| Conread position: | 43-270 |
| Cow position: | chr15:23332534-23332756 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 108, 24 |
| Conread position: | 43-303 |
| Cow position: | chr15:5527540-5527268 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 43-303 |
| Cow position: | chr15:9928708-9928447 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 113, 134 |
| Conread position: | 43-303 |
| Cow position: | chr15:26421247-26421514 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 105, 42 |
| Conread position: | 44-214 |
| Cow position: | chr15:10487546-10487725 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 45-191 |
| Cow position: | chr15:31855170-31855318 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 35, 76 |
| Conread position: | 45-278 |
| Cow position: | chr15:1830916-1830671 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 45-293 |
| Cow position: | chr15:27247863-27247596 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 45-303 |
| Cow position: | chr15:24285336-24285067 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 32, 228 |
| Conread position: | 45-396 |
| Cow position: | chr15:20117460-20117111 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 108 |
| Conread position: | 47-197 |
| Cow position: | chr15:26896364-26896522 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 47-303 |
| Cow position: | chr15:22713482-22713746 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 162 |
| Conread position: | 47-303 |
| Cow position: | chr15:27732746-27732498 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 31, 139 |
| Conread position: | 48-290 |
| Cow position: | chr15:52154441-52154691 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 32, 133 |
| Conread position: | 48-294 |
| Cow position: | chr15:10615394-10615637 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 28, 95 |
| Conread position: | 51-274 |
| Cow position: | chr15:794669-794900 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 27, 158 |
| Conread position: | 51-282 |
| Cow position: | chr15:44209915-44209673 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 51-303 |
| Cow position: | chr15:3572360-3572616 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 104 |
| Conread position: | 51-306 |
| Cow position: | chr15:15215364-15215101 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 27, 222 |
| Conread position: | 53-286 |
| Cow position: | chr15:37964883-37964634 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 53-303 |
| Cow position: | chr15:26673250-26673498 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 128 |
| Conread position: | 54-301 |
| Cow position: | chr15:9177871-9178117 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 24, 111 |
| Conread position: | 54-303 |
| Cow position: | chr15:21837030-21836767 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 25, 88 |
| Conread position: | 55-298 |
| Cow position: | chr15:13554681-13554444 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 56-271 |
| Cow position: | chr15:6627953-6628169 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 34 |
| Conread position: | 56-274 |
| Cow position: | chr15:5730276-5730058 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 22, 79 |
| Conread position: | 57-258 |
| Cow position: | chr15:22938439-22938632 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 101 |
| Conread position: | 62-269 |
| Cow position: | chr15:16823269-16823058 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 204 |
| Conread position: | 68-284 |
| Cow position: | chr15:20401588-20401800 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 8, 125 |
| Conread position: | 68-302 |
| Cow position: | chr15:22886874-22886636 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 89, 70 |
| Conread position: | 70-260 |
| Cow position: | chr15:4857118-4856916 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 47, 11 |
| Conread position: | 71-270 |
| Cow position: | chr15:26701754-26701959 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 71-303 |
| Cow position: | chr15:17213774-17213540 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 73, 117 |
| Conread position: | 77-286 |
| Cow position: | chr15:31157431-31157214 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 70, 208 |
| Conread position: | 83-303 |
| Cow position: | chr15:51583532-51583313 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 65, 14 |
| Conread position: | 89-303 |
| Cow position: | chr15:31599637-31599417 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 31 |
| Conread position: | 89-303 |
| Cow position: | chr15:31907954-31907732 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 32 |
| Conread position: | 93-271 |
| Cow position: | chr15:11646189-11646370 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 17 |
| Conread position: | 97-270 |
| Cow position: | chr15:9072134-9072311 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 100-303 |
| Cow position: | chr15:36671741-36671953 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 61, 145 |
| Conread position: | 102-375 |
| Cow position: | chr15:27282096-27281826 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 55, 177 |
| Conread position: | 120-278 |
| Cow position: | chr15:23957976-23957814 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 156 |
| Conread position: | 123-297 |
| Cow position: | chr15:50994016-50993832 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 25, 151 |
| Conread position: | 136-303 |
| Cow position: | chr15:33770874-33770701 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 160-306 |
| Cow position: | chr15:16825063-16824913 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
Show alignments to all cow chromosomes.