Cow genome map


           Conread name:
           LyN2-AR060E02LN05AFE02F
        

               Conread position:
               18-189
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               19-294
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               116, 58
               

               Conread position:
               21-252
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               57, 70
               

               Conread position:
               21-303
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               57, 179
               

               Conread position:
               21-330
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               136, 39
               

               Conread position:
               25-253
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               25-303
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               51, 41
               

               Conread position:
               27-259
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               51, 69
               

               Conread position:
               27-264
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 91
               

               Conread position:
               31-262
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               49, 125
               

               Conread position:
               31-269
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               125, 36
               

               Conread position:
               33-288
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               35-270
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               123, 32
               

               Conread position:
               35-283
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               43, 213
               

               Conread position:
               35-303
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               43, 204
               

               Conread position:
               35-307
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               43, 24
               

               Conread position:
               36-306
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               40, 11
               

               Conread position:
               37-270
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               41, 233
               

               Conread position:
               37-270
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               114, 30
               

               Conread position:
               37-292
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               34, 170
               

               Conread position:
               37-305
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               40, 80
               

               Conread position:
               38-197
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 80
               

               Conread position:
               38-269
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               39, 18
               

               Conread position:
               39-258
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 78
               

               Conread position:
               39-279
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               32, 124
               

               Conread position:
               39-303
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               39-303
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               41, 164
               

               Conread position:
               40-264
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               38, 78
               

               Conread position:
               40-303
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               18, 96
               

               Conread position:
               41-301
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               37, 116
               

               Conread position:
               42-303
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               34, 183
               

               Conread position:
               42-303
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               36, 158
               

               Conread position:
               43-191
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               43-290
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               28, 22
               

               Conread position:
               43-294
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               43-303
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               37, 72
               

               Conread position:
               45-268
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               110, 21
               

               Conread position:
               45-275
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               93, 30
               

               Conread position:
               45-291
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               31, 234
               

               Conread position:
               45-303
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               45-306
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               33, 179
               

               Conread position:
               46-197
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               46-295
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               47-257
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               27, 62
               

               Conread position:
               47-258
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               47-259
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               31, 73
               

               Conread position:
               47-261
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               47-264
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               47-270
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               31, 114
               

               Conread position:
               47-280
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 45
               

               Conread position:
               47-294
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               31, 242
               

               Conread position:
               47-295
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               29, 68
               

               Conread position:
               47-303
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               111, 31
               

               Conread position:
               47-391
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 260
               

               Conread position:
               48-263
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               48-268
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               28, 76
               

               Conread position:
               48-305
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               95, 27
               

               Conread position:
               51-270
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 49
               

               Conread position:
               51-280
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 153
               

               Conread position:
               51-303
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               27, 146
               

               Conread position:
               51-352
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               106, 37
               

               Conread position:
               51-403
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 46
               

               Conread position:
               53-264
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               53-271
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               53-296
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               54-273
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               54-302
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               186
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               102, 246
               

               Conread position:
               56-268
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               133, 20
               

               Conread position:
               58-268
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               59-306
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 18
               

               Conread position:
               62-293
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               66-278
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               68-264
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               8, 161
               

               Conread position:
               70-267
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               70-269
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               89-301
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               56, 181
               

               Conread position:
               89-302
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 26
               

               Conread position:
               100-303
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               57, 114
               

               Conread position:
               126-337
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               133-303
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               24, 70
               

               Conread position:
               175-294
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               179-396
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 122
               
Show alignments to all cow chromosomes.