Cow genome map
| Conread name: | LyN2-AR060E02LN05AFE02F |
| Conread position: | 1-306 |
| Cow position: | chr19:19924912-19924604 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 77 |
| Conread position: | 21-302 |
| Cow position: | chr19:19661746-19662037 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 21-303 |
| Cow position: | chr19:21285381-21285087 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 51, 265 |
| Conread position: | 25-277 |
| Cow position: | chr19:35064476-35064223 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 166, 115 |
| Conread position: | 25-281 |
| Cow position: | chr19:27612459-27612202 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 51, 149 |
| Conread position: | 27-290 |
| Cow position: | chr19:9704120-9703858 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 57, 126 |
| Conread position: | 31-272 |
| Cow position: | chr19:36602091-36602343 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 116, 66 |
| Conread position: | 34-280 |
| Cow position: | chr19:2771290-2771043 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 40, 84 |
| Conread position: | 35-303 |
| Cow position: | chr19:48478687-48478972 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 38-269 |
| Cow position: | chr19:6688284-6688039 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 39-197 |
| Cow position: | chr19:53645692-53645529 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 39-246 |
| Cow position: | chr19:39056967-39057179 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 39, 77 |
| Conread position: | 39-264 |
| Cow position: | chr19:41212330-41212097 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 39-270 |
| Cow position: | chr19:35540026-35540255 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 121 |
| Conread position: | 39-280 |
| Cow position: | chr19:33306819-33307068 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 37, 232 |
| Conread position: | 39-303 |
| Cow position: | chr19:2821301-2821575 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 39-303 |
| Cow position: | chr19:6515983-6516261 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 39-303 |
| Cow position: | chr19:36461804-36461538 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 44, 184 |
| Conread position: | 39-306 |
| Cow position: | chr19:35380825-35380559 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 41-187 |
| Cow position: | chr19:7065917-7066061 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 39, 102 |
| Conread position: | 41-263 |
| Cow position: | chr19:25637775-25637543 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 41-269 |
| Cow position: | chr19:40051661-40051434 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 53 |
| Conread position: | 42-253 |
| Cow position: | chr19:21065504-21065708 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 42-294 |
| Cow position: | chr19:19673144-19673398 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 92 |
| Conread position: | 42-303 |
| Cow position: | chr19:33281096-33281349 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 34, 98 |
| Conread position: | 43-294 |
| Cow position: | chr19:28921557-28921808 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 113, 38 |
| Conread position: | 43-303 |
| Cow position: | chr19:25711604-25711329 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 237 |
| Conread position: | 45-246 |
| Cow position: | chr19:12698052-12698253 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 160 |
| Conread position: | 45-303 |
| Cow position: | chr19:38907623-38907365 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 116, 22 |
| Conread position: | 47-264 |
| Cow position: | chr19:14592781-14593007 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 29, 160 |
| Conread position: | 47-269 |
| Cow position: | chr19:15887592-15887366 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 47-275 |
| Cow position: | chr19:47118768-47118531 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 47-281 |
| Cow position: | chr19:8839333-8839571 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 31, 232 |
| Conread position: | 47-290 |
| Cow position: | chr19:30276680-30276912 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 20 |
| Conread position: | 47-290 |
| Cow position: | chr19:31826840-31827079 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 36, 81 |
| Conread position: | 47-302 |
| Cow position: | chr19:18788373-18788115 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 14, 218 |
| Conread position: | 47-302 |
| Cow position: | chr19:55236223-55236482 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 31, 91 |
| Conread position: | 47-303 |
| Cow position: | chr19:32214535-32214791 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 30, 81 |
| Conread position: | 48-269 |
| Cow position: | chr19:15068262-15068046 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 31, 69 |
| Conread position: | 51-246 |
| Cow position: | chr19:25053940-25053737 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 51-264 |
| Cow position: | chr19:38596349-38596573 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 27, 156 |
| Conread position: | 51-269 |
| Cow position: | chr19:35782398-35782173 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 33, 151 |
| Conread position: | 51-287 |
| Cow position: | chr19:9387368-9387612 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 27, 71 |
| Conread position: | 51-303 |
| Cow position: | chr19:33306038-33306301 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 53-294 |
| Cow position: | chr19:43516972-43517218 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 27, 160 |
| Conread position: | 53-368 |
| Cow position: | chr19:56018787-56018477 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 90, 24 |
| Conread position: | 54-258 |
| Cow position: | chr19:38396534-38396331 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 54-303 |
| Cow position: | chr19:2342213-2342474 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 56-303 |
| Cow position: | chr19:18242682-18242433 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 22, 107 |
| Conread position: | 58-290 |
| Cow position: | chr19:6881137-6880894 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 20, 29 |
| Conread position: | 59-275 |
| Cow position: | chr19:51185168-51185389 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 138 |
| Conread position: | 59-302 |
| Cow position: | chr19:54225556-54225316 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 21, 116 |
| Conread position: | 61-297 |
| Cow position: | chr19:31381252-31381009 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 19, 184 |
| Conread position: | 64-294 |
| Cow position: | chr19:36977169-36976929 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 71-306 |
| Cow position: | chr19:44489848-44490091 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 77, 38 |
| Conread position: | 89-303 |
| Cow position: | chr19:35344710-35344917 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 10, 116 |
| Conread position: | 97-281 |
| Cow position: | chr19:27346857-27346680 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 101, 44 |
| Conread position: | 142-303 |
| Cow position: | chr19:15936671-15936828 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 53, 76 |
| Conread position: | 167-391 |
| Cow position: | chr19:29353045-29353267 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 27, 110 |
Show alignments to all cow chromosomes.