Cow genome map

Conread name: LyN2-AR060E02LN05AFE02F

Conread position: 1-301
Cow position: chr2:14749291-14749594 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 224

Conread position: 4-388
Cow position: chr2:73069416-73069809 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 315

Conread position: 5-292
Cow position: chr2:40492069-40492360 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 223

Conread position: 11-306
Cow position: chr2:40428097-40427786 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 67, 77

Conread position: 13-290
Cow position: chr2:52776988-52777267 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 191

Conread position: 15-263
Cow position: chr2:50606259-50606511 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 129

Conread position: 16-237
Cow position: chr2:469368-469591 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 55, 134

Conread position: 17-262
Cow position: chr2:53717269-53717023 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 60

Conread position: 20-283
Cow position: chr2:13354390-13354658 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 51, 185

Conread position: 20-284
Cow position: chr2:64972796-64973050 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 136, 57

Conread position: 20-303
Cow position: chr2:10868178-10867894 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 168

Conread position: 23-199
Cow position: chr2:4477831-4478015 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 31

Conread position: 23-264
Cow position: chr2:45469722-45469971 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 55, 224

Conread position: 25-304
Cow position: chr2:42183091-42183375 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 123, 54

Conread position: 29-303
Cow position: chr2:34256579-34256293 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 101, 67

Conread position: 29-305
Cow position: chr2:29382949-29382675 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 49, 58

Conread position: 31-303
Cow position: chr2:22859911-22859637 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 160, 134

Conread position: 33-303
Cow position: chr2:63865604-63865323 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 35-308
Cow position: chr2:70663755-70664024 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 121, 32

Conread position: 37-269
Cow position: chr2:71495120-71495361 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 95

Conread position: 38-257
Cow position: chr2:42800780-42801002 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 123, 38

Conread position: 38-294
Cow position: chr2:27338041-27337781 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 38, 103

Conread position: 39-268
Cow position: chr2:29268798-29269028 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 26

Conread position: 39-273
Cow position: chr2:56828834-56828591 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 165

Conread position: 39-274
Cow position: chr2:43773841-43773602 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 39, 95

Conread position: 39-308
Cow position: chr2:42599663-42599942 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 37, 229

Conread position: 40-258
Cow position: chr2:50277757-50277984 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 151
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 40-269
Cow position: chr2:13001546-13001773 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 218, 39

Conread position: 41-197
Cow position: chr2:68110007-68109846 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 41-275
Cow position: chr2:45554056-45554291 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 144, 37

Conread position: 41-290
Cow position: chr2:74209587-74209345 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 120, 36

Conread position: 42-303
Cow position: chr2:4384155-4383895 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 34, 121

Conread position: 43-279
Cow position: chr2:13726157-13725931 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 35, 116

Conread position: 43-301
Cow position: chr2:51594503-51594765 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 28, 237

Conread position: 43-303
Cow position: chr2:52170989-52171258 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 35, 169

Conread position: 43-306
Cow position: chr2:31155453-31155717 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 153

Conread position: 45-191
Cow position: chr2:8245294-8245443 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 112, 32

Conread position: 45-263
Cow position: chr2:56102726-56102501 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 102, 22

Conread position: 45-299
Cow position: chr2:57509157-57509404 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 172, 22

Conread position: 45-303
Cow position: chr2:33659962-33659700 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 93

Conread position: 45-306
Cow position: chr2:10295842-10296102 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 170
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 217

Conread position: 47-256
Cow position: chr2:16692898-16693112 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 31, 159

Conread position: 47-258
Cow position: chr2:2375-2171 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 147

Conread position: 47-274
Cow position: chr2:51799579-51799349 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 156
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 88

Conread position: 47-279
Cow position: chr2:50580111-50580353 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 29, 230

Conread position: 47-282
Cow position: chr2:21182901-21183145 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 191

Conread position: 47-288
Cow position: chr2:13684448-13684683 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 151

Conread position: 47-303
Cow position: chr2:7721162-7720907 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 28, 54

Conread position: 47-303
Cow position: chr2:17940544-17940284 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 110, 53

Conread position: 47-303
Cow position: chr2:31457230-31457491 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 12

Conread position: 47-303
Cow position: chr2:39855531-39855794 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 35

Conread position: 47-303
Cow position: chr2:62225924-62226181 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 58

Conread position: 47-307
Cow position: chr2:18061888-18061622 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 31, 154

Conread position: 48-266
Cow position: chr2:14884028-14884251 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 208

Conread position: 48-284
Cow position: chr2:4070663-4070905 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 107, 19

Conread position: 51-193
Cow position: chr2:62501573-62501429 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 77

Conread position: 51-259
Cow position: chr2:70601749-70601970 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 12

Conread position: 51-293
Cow position: chr2:40836417-40836175 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 29, 187

Conread position: 51-293
Cow position: chr2:80800465-80800697 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 76

Conread position: 51-303
Cow position: chr2:70579967-70579701 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 51-306
Cow position: chr2:6055713-6055973 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 149

Conread position: 51-308
Cow position: chr2:64323001-64323251 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 159, 25

Conread position: 53-302
Cow position: chr2:64197234-64196990 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 23, 110

Conread position: 53-303
Cow position: chr2:11696878-11697129 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 153

Conread position: 54-269
Cow position: chr2:42643345-42643127 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 198

Conread position: 54-294
Cow position: chr2:41313638-41313888 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 0

Conread position: 55-303
Cow position: chr2:49480849-49480587 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 56-278
Cow position: chr2:36997907-36998138 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 57-294
Cow position: chr2:14555999-14555754 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 21, 148

Conread position: 57-396
Cow position: chr2:46359297-46358946 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 247
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 20, 264

Conread position: 59-268
Cow position: chr2:32498873-32498661 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 67

Conread position: 60-270
Cow position: chr2:85339705-85339490 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 130

Conread position: 63-275
Cow position: chr2:72583667-72583881 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 73, 14

Conread position: 66-303
Cow position: chr2:50400180-50400429 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 10, 0

Conread position: 68-257
Cow position: chr2:80963881-80963688 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 72

Conread position: 68-296
Cow position: chr2:40313133-40313365 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 10, 20

Conread position: 68-303
Cow position: chr2:15249946-15250184 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 134

Conread position: 70-259
Cow position: chr2:15769722-15769531 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 86, 133

Conread position: 70-273
Cow position: chr2:16428634-16428426 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 88, 136

Conread position: 70-273
Cow position: chr2:34535391-34535182 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 56, 104

Conread position: 70-303
Cow position: chr2:793414-793649 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 143

Conread position: 74-301
Cow position: chr2:59380698-59380482 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 128, 18

Conread position: 89-288
Cow position: chr2:1651189-1651393 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 138

Conread position: 89-303
Cow position: chr2:19154094-19154314 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 106, 52

Conread position: 89-303
Cow position: chr2:60463030-60462820 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 104, 71

Conread position: 89-303
Cow position: chr2:60468409-60468199 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 104, 71

Conread position: 89-303
Cow position: chr2:69419792-69419583 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 23

Conread position: 89-400
Cow position: chr2:66797099-66796787 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 32

Conread position: 91-270
Cow position: chr2:82648032-82647849 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 116

Conread position: 92-263
Cow position: chr2:39513815-39513987 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 13

Conread position: 94-294
Cow position: chr2:56042554-56042366 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 97-301
Cow position: chr2:2382769-2382554 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 104-284
Cow position: chr2:9324794-9324982 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 151

Conread position: 107-301
Cow position: chr2:80595509-80595310 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 129

Conread position: 113-272
Cow position: chr2:61820980-61820812 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 121-273
Cow position: chr2:39471950-39472105 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 145

Conread position: 136-330
Cow position: chr2:60182474-60182278 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 150, 0

Conread position: 176-396
Cow position: chr2:56761969-56762186 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 23, 60

Show alignments to all cow chromosomes.