Cow genome map
| Conread name: | LyN2-AR060E02LN05AFE02F |
| Conread position: | 8-303 |
| Cow position: | chr20:20471534-20471829 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 22, 104 |
| Conread position: | 10-396 |
| Cow position: | chr20:12041401-12041010 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 271 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 46, 111 |
| Conread position: | 16-303 |
| Cow position: | chr20:10759712-10759428 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 62, 106 |
| Conread position: | 19-292 |
| Cow position: | chr20:24869272-24868998 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 60, 188 |
| Conread position: | 24-269 |
| Cow position: | chr20:38578993-38578751 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 138, 53 |
| Conread position: | 29-277 |
| Cow position: | chr20:35897284-35897539 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 32-213 |
| Cow position: | chr20:37190286-37190470 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 68 |
| Conread position: | 37-302 |
| Cow position: | chr20:14831839-14831569 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 199 |
| Conread position: | 39-268 |
| Cow position: | chr20:9412272-9412495 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 150, 39 |
| Conread position: | 39-280 |
| Cow position: | chr20:20202992-20203239 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 158 |
| Conread position: | 39-291 |
| Cow position: | chr20:24069591-24069837 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 37, 20 |
| Conread position: | 39-294 |
| Cow position: | chr20:26076861-26077118 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 37, 155 |
| Conread position: | 39-298 |
| Cow position: | chr20:19238654-19238385 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 39-307 |
| Cow position: | chr20:18185355-18185615 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 34, 99 |
| Conread position: | 40-303 |
| Cow position: | chr20:38123664-38123932 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 77, 37 |
| Conread position: | 41-270 |
| Cow position: | chr20:22445856-22445624 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 35, 168 |
| Conread position: | 41-303 |
| Cow position: | chr20:6571110-6571380 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 37, 97 |
| Conread position: | 41-303 |
| Cow position: | chr20:27843429-27843697 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 167 |
| Conread position: | 41-303 |
| Cow position: | chr20:32578142-32577873 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 77 |
| Conread position: | 42-269 |
| Cow position: | chr20:41500764-41500526 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 43-302 |
| Cow position: | chr20:13048638-13048369 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 35, 229 |
| Conread position: | 43-303 |
| Cow position: | chr20:13821802-13821534 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 99, 41 |
| Conread position: | 43-303 |
| Cow position: | chr20:17669962-17670228 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 35, 165 |
| Conread position: | 47-197 |
| Cow position: | chr20:14718956-14718803 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 47-268 |
| Cow position: | chr20:17251495-17251727 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 114, 30 |
| Conread position: | 47-269 |
| Cow position: | chr20:35958433-35958657 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 108, 21 |
| Conread position: | 47-303 |
| Cow position: | chr20:14679402-14679667 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 47-308 |
| Cow position: | chr20:9473830-9473563 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 31, 110 |
| Conread position: | 51-267 |
| Cow position: | chr20:8020683-8020908 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 51-274 |
| Cow position: | chr20:15577103-15576870 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 27, 75 |
| Conread position: | 51-287 |
| Cow position: | chr20:4204080-4204322 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 177 |
| Conread position: | 51-303 |
| Cow position: | chr20:5576556-5576820 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 25, 35 |
| Conread position: | 51-303 |
| Cow position: | chr20:13955829-13956091 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 27, 47 |
| Conread position: | 51-404 |
| Cow position: | chr20:18413645-18413983 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 91, 26 |
| Conread position: | 55-303 |
| Cow position: | chr20:25686559-25686303 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 152 |
| Conread position: | 58-396 |
| Cow position: | chr20:28888687-28889038 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 90, 18 |
| Conread position: | 62-298 |
| Cow position: | chr20:15074033-15073794 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 15, 133 |
| Conread position: | 67-303 |
| Cow position: | chr20:20359971-20359738 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 149, 126 |
| Conread position: | 81-290 |
| Cow position: | chr20:38028187-38027983 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 117 |
| Conread position: | 117-293 |
| Cow position: | chr20:19340011-19339840 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 82, 33 |
| Conread position: | 136-375 |
| Cow position: | chr20:37609106-37609348 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 20, 173 |
| Conread position: | 142-303 |
| Cow position: | chr20:11355099-11355264 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 35 |
| Conread position: | 166-399 |
| Cow position: | chr20:15917889-15918116 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 29, 138 |
| Conread position: | 193-399 |
| Cow position: | chr20:7062316-7062520 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 8, 109 |
Show alignments to all cow chromosomes.