Cow genome map

Conread name: LyN2-AR060E02LN05AFE02F

Conread position: 11-301
Cow position: chr22:27223836-27224123 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 40

Conread position: 13-198
Cow position: chr22:34886369-34886559 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 63, 0

Conread position: 13-303
Cow position: chr22:9520854-9521141 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 64

Conread position: 15-280
Cow position: chr22:13210335-13210600 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 160

Conread position: 15-284
Cow position: chr22:23861437-23861166 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 61

Conread position: 17-259
Cow position: chr22:27791177-27791422 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 106, 60

Conread position: 24-285
Cow position: chr22:16057416-16057683 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 175
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 54, 117

Conread position: 25-280
Cow position: chr22:9127122-9127384 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 51, 60

Conread position: 25-303
Cow position: chr22:35382535-35382246 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 51, 102

Conread position: 29-294
Cow position: chr22:13235266-13235528 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 48, 115

Conread position: 35-290
Cow position: chr22:13187598-13187867 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 209

Conread position: 35-303
Cow position: chr22:41244972-41245246 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 31, 44

Conread position: 36-303
Cow position: chr22:11258009-11257745 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 42, 154

Conread position: 37-272
Cow position: chr22:27581177-27581408 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 157, 41

Conread position: 37-308
Cow position: chr22:11130604-11130873 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 179
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 30

Conread position: 38-257
Cow position: chr22:29955270-29955045 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 40, 78

Conread position: 38-295
Cow position: chr22:42605365-42605627 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 104, 29

Conread position: 39-190
Cow position: chr22:33509716-33509566 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 65, 39

Conread position: 39-253
Cow position: chr22:1484592-1484810 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 165

Conread position: 39-257
Cow position: chr22:2502568-2502781 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 157

Conread position: 39-264
Cow position: chr22:14882381-14882154 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 39, 167

Conread position: 39-268
Cow position: chr22:14602665-14602432 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 203

Conread position: 39-280
Cow position: chr22:10685352-10685113 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 117, 38

Conread position: 40-293
Cow position: chr22:2476478-2476218 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 53

Conread position: 41-267
Cow position: chr22:26316211-26316435 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 155
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 153, 21

Conread position: 41-273
Cow position: chr22:37201589-37201822 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 67

Conread position: 41-296
Cow position: chr22:19592146-19592411 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 78

Conread position: 43-197
Cow position: chr22:11987483-11987321 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 43-297
Cow position: chr22:23798984-23798720 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 262

Conread position: 44-303
Cow position: chr22:11778875-11778610 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 100, 23

Conread position: 45-268
Cow position: chr22:7153625-7153851 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 13

Conread position: 45-280
Cow position: chr22:6215818-6215581 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 81

Conread position: 45-303
Cow position: chr22:13840878-13841138 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 129, 22

Conread position: 45-303
Cow position: chr22:26184424-26184162 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 71

Conread position: 46-269
Cow position: chr22:27514401-27514633 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 32, 73

Conread position: 47-257
Cow position: chr22:4017213-4017431 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 145
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 47-264
Cow position: chr22:24066497-24066275 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 158

Conread position: 47-275
Cow position: chr22:4650919-4651152 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 31, 225

Conread position: 47-288
Cow position: chr22:31497365-31497120 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 169

Conread position: 47-295
Cow position: chr22:26057128-26057371 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 71

Conread position: 47-303
Cow position: chr22:44835380-44835647 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 0

Conread position: 48-269
Cow position: chr22:10683926-10683696 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 32, 210

Conread position: 48-293
Cow position: chr22:35520524-35520267 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 30, 242

Conread position: 48-303
Cow position: chr22:19048064-19047817 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 169
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 163, 66

Conread position: 51-246
Cow position: chr22:43044422-43044220 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 100, 25

Conread position: 51-261
Cow position: chr22:25784181-25783965 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 96, 26

Conread position: 51-298
Cow position: chr22:1975354-1975609 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 51-303
Cow position: chr22:19653239-19652985 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 33, 50

Conread position: 51-303
Cow position: chr22:32221404-32221641 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 144, 40

Conread position: 51-367
Cow position: chr22:9155626-9155316 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 27, 178

Conread position: 53-270
Cow position: chr22:30269159-30269376 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 43

Conread position: 53-306
Cow position: chr22:6566899-6566644 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 90

Conread position: 54-292
Cow position: chr22:7518161-7518411 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 0

Conread position: 54-303
Cow position: chr22:23010188-23009938 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 73

Conread position: 60-398
Cow position: chr22:39452341-39452688 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 97, 253

Conread position: 66-270
Cow position: chr22:4161855-4161646 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 10, 136

Conread position: 66-284
Cow position: chr22:11746149-11745924 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 12, 22

Conread position: 68-307
Cow position: chr22:19738816-19738567 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 89, 10

Conread position: 70-294
Cow position: chr22:25714775-25714995 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 9

Conread position: 72-303
Cow position: chr22:14118739-14118979 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 89, 216

Conread position: 89-281
Cow position: chr22:33918117-33917919 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 68, 85

Conread position: 89-303
Cow position: chr22:15665997-15666211 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 105, 51

Conread position: 92-289
Cow position: chr22:5622934-5622730 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 93-303
Cow position: chr22:26011654-26011874 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 63, 146

Conread position: 97-306
Cow position: chr22:19040579-19040362 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 184-297
Cow position: chr22:24072011-24071896 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Show alignments to all cow chromosomes.