Cow genome map
| Conread name: | LyN2-AR060E02LN05AFE02F |
| Conread position: | 15-290 |
| Cow position: | chr23:16237550-16237258 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 27-258 |
| Cow position: | chr23:6683456-6683680 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 51, 158 |
| Conread position: | 34-292 |
| Cow position: | chr23:9711859-9711587 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 37-191 |
| Cow position: | chr23:14896070-14895909 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 38-303 |
| Cow position: | chr23:2371116-2371378 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 118, 40 |
| Conread position: | 39-204 |
| Cow position: | chr23:1905763-1905933 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 39, 152 |
| Conread position: | 39-252 |
| Cow position: | chr23:9268325-9268547 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 39-253 |
| Cow position: | chr23:3918363-3918142 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 39-270 |
| Cow position: | chr23:21343511-21343279 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 109, 28 |
| Conread position: | 39-303 |
| Cow position: | chr23:645066-645332 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 39, 56 |
| Conread position: | 39-303 |
| Cow position: | chr23:1924098-1923833 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 121, 38 |
| Conread position: | 40-197 |
| Cow position: | chr23:35363037-35362875 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 40-302 |
| Cow position: | chr23:39778149-39778404 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 41-254 |
| Cow position: | chr23:11404523-11404299 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 32, 22 |
| Conread position: | 43-303 |
| Cow position: | chr23:20781563-20781826 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 35, 153 |
| Conread position: | 44-269 |
| Cow position: | chr23:1803534-1803762 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 92, 34 |
| Conread position: | 45-189 |
| Cow position: | chr23:26003805-26003953 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 45-307 |
| Cow position: | chr23:20171319-20171587 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 46-303 |
| Cow position: | chr23:15872959-15872690 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 47-280 |
| Cow position: | chr23:10852795-10853036 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 33, 88 |
| Conread position: | 47-281 |
| Cow position: | chr23:37065580-37065826 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 47-302 |
| Cow position: | chr23:16058342-16058598 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 24, 159 |
| Conread position: | 47-303 |
| Cow position: | chr23:20752756-20753020 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 47-303 |
| Cow position: | chr23:25408583-25408838 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 156, 23 |
| Conread position: | 48-255 |
| Cow position: | chr23:9641675-9641461 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 163 |
| Conread position: | 48-293 |
| Cow position: | chr23:31607416-31607156 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 28, 227 |
| Conread position: | 51-303 |
| Cow position: | chr23:37224319-37224062 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 39, 163 |
| Conread position: | 51-303 |
| Cow position: | chr23:41590162-41589911 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 97, 182 |
| Conread position: | 53-290 |
| Cow position: | chr23:33940407-33940168 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 152 |
| Conread position: | 53-308 |
| Cow position: | chr23:38854985-38854726 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 25, 46 |
| Conread position: | 54-258 |
| Cow position: | chr23:38248650-38248854 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 24, 86 |
| Conread position: | 59-303 |
| Cow position: | chr23:40862094-40862350 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 19, 237 |
| Conread position: | 59-396 |
| Cow position: | chr23:3745358-3745706 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 20, 252 |
| Conread position: | 67-402 |
| Cow position: | chr23:25407686-25407356 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 90, 18 |
| Conread position: | 71-303 |
| Cow position: | chr23:21659707-21659950 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 85, 14 |
| Conread position: | 74-269 |
| Cow position: | chr23:18296578-18296780 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 82-324 |
| Cow position: | chr23:32662355-32662605 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 73, 105 |
| Conread position: | 89-286 |
| Cow position: | chr23:23470730-23470925 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 89-303 |
| Cow position: | chr23:28895181-28894950 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 98-303 |
| Cow position: | chr23:35177113-35177324 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 100 |
| Conread position: | 101-295 |
| Cow position: | chr23:30773881-30773683 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 10, 171 |
| Conread position: | 162-396 |
| Cow position: | chr23:496515-496282 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 37, 143 |
| Conread position: | 211-384 |
| Cow position: | chr23:35374042-35373869 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 68, 104 |
| Conread position: | 230-375 |
| Cow position: | chr23:11553821-11553966 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 34, 80 |
Show alignments to all cow chromosomes.