Cow genome map
| Conread name: | LyN2-AR060E02LN05AFE02F |
| Conread position: | 1-299 |
| Cow position: | chr25:10449006-10448714 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 141 |
| Conread position: | 8-303 |
| Cow position: | chr25:11131285-11131583 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 148, 80 |
| Conread position: | 9-303 |
| Cow position: | chr25:24406039-24405734 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 280 |
| Conread position: | 12-257 |
| Cow position: | chr25:9990385-9990143 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 66, 37 |
| Conread position: | 17-275 |
| Cow position: | chr25:35332882-35333133 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 96, 60 |
| Conread position: | 23-275 |
| Cow position: | chr25:35625456-35625210 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 139, 54 |
| Conread position: | 24-286 |
| Cow position: | chr25:35344754-35345011 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 56, 174 |
| Conread position: | 30-293 |
| Cow position: | chr25:8512369-8512098 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 116, 47 |
| Conread position: | 31-295 |
| Cow position: | chr25:10012326-10012052 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 47, 137 |
| Conread position: | 33-339 |
| Cow position: | chr25:5837241-5836930 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 45, 175 |
| Conread position: | 34-290 |
| Cow position: | chr25:34668971-34669231 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 36-308 |
| Cow position: | chr25:20076222-20076501 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 40, 125 |
| Conread position: | 37-272 |
| Cow position: | chr25:24227607-24227369 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 41, 57 |
| Conread position: | 38-269 |
| Cow position: | chr25:27504455-27504210 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 39-257 |
| Cow position: | chr25:5514738-5514966 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 39-263 |
| Cow position: | chr25:17658346-17658568 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 37, 71 |
| Conread position: | 39-267 |
| Cow position: | chr25:12204201-12204435 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 39-303 |
| Cow position: | chr25:16922061-16921798 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 39-303 |
| Cow position: | chr25:25827196-25827470 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 109, 39 |
| Conread position: | 39-308 |
| Cow position: | chr25:9957301-9957034 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 39, 77 |
| Conread position: | 41-267 |
| Cow position: | chr25:6424852-6424622 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 107, 36 |
| Conread position: | 42-303 |
| Cow position: | chr25:33691288-33691558 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 34, 197 |
| Conread position: | 44-258 |
| Cow position: | chr25:17566323-17566544 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 44-303 |
| Cow position: | chr25:18161039-18161287 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 132, 74 |
| Conread position: | 45-303 |
| Cow position: | chr25:20625192-20624932 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 47-268 |
| Cow position: | chr25:26654646-26654876 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 47-269 |
| Cow position: | chr25:9961439-9961203 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 164 |
| Conread position: | 47-287 |
| Cow position: | chr25:12239400-12239162 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 109, 29 |
| Conread position: | 47-303 |
| Cow position: | chr25:40957247-40956985 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 23, 71 |
| Conread position: | 47-396 |
| Cow position: | chr25:37687421-37687094 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 37, 107 |
| Conread position: | 48-277 |
| Cow position: | chr25:22575778-22575545 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 73, 33 |
| Conread position: | 51-197 |
| Cow position: | chr25:18448580-18448734 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 51-268 |
| Cow position: | chr25:21895140-21894920 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 108, 26 |
| Conread position: | 51-278 |
| Cow position: | chr25:20496283-20496512 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 82 |
| Conread position: | 53-303 |
| Cow position: | chr25:10137843-10138093 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 25, 150 |
| Conread position: | 53-305 |
| Cow position: | chr25:36081619-36081878 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 226 |
| Conread position: | 55-300 |
| Cow position: | chr25:14467335-14467085 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 193 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 102, 22 |
| Conread position: | 55-302 |
| Cow position: | chr25:4002543-4002800 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 23, 243 |
| Conread position: | 59-396 |
| Cow position: | chr25:19129604-19129940 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 60-303 |
| Cow position: | chr25:395107-395353 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 15, 57 |
| Conread position: | 66-274 |
| Cow position: | chr25:1735558-1735344 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 12, 191 |
| Conread position: | 66-291 |
| Cow position: | chr25:8576451-8576677 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 156 |
| Conread position: | 77-303 |
| Cow position: | chr25:17365486-17365259 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 92, 47 |
| Conread position: | 118-400 |
| Cow position: | chr25:22477564-22477266 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 100, 28 |
Show alignments to all cow chromosomes.