Cow genome map
| Conread name: | LyN2-AR060E02LN05AFE02F |
| Conread position: | 1-278 |
| Cow position: | chr28:24996889-24996604 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 99 |
| Conread position: | 6-303 |
| Cow position: | chr28:21569892-21570197 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 24, 232 |
| Conread position: | 12-306 |
| Cow position: | chr28:28414382-28414679 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 65 |
| Conread position: | 15-281 |
| Cow position: | chr28:21873487-21873761 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 20-302 |
| Cow position: | chr28:19026283-19026000 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 99 |
| Conread position: | 24-293 |
| Cow position: | chr28:13176955-13176685 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 169 |
| Conread position: | 29-280 |
| Cow position: | chr28:34150802-34150541 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 29-302 |
| Cow position: | chr28:3769926-3769659 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 47, 97 |
| Conread position: | 31-273 |
| Cow position: | chr28:9177023-9176776 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 47, 167 |
| Conread position: | 33-284 |
| Cow position: | chr28:32300627-32300369 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 35-303 |
| Cow position: | chr28:18139717-18139450 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 43, 197 |
| Conread position: | 39-197 |
| Cow position: | chr28:16879529-16879372 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 74 |
| Conread position: | 39-258 |
| Cow position: | chr28:17316599-17316831 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 39-264 |
| Cow position: | chr28:10534190-10533964 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 54 |
| Conread position: | 39-269 |
| Cow position: | chr28:9390626-9390390 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 32, 166 |
| Conread position: | 39-273 |
| Cow position: | chr28:14493281-14493520 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 39-275 |
| Cow position: | chr28:11380304-11380062 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 39, 161 |
| Conread position: | 39-281 |
| Cow position: | chr28:3914449-3914699 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 40, 164 |
| Conread position: | 39-284 |
| Cow position: | chr28:4282753-4282503 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 169 |
| Conread position: | 43-264 |
| Cow position: | chr28:17287967-17288188 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 116 |
| Conread position: | 43-268 |
| Cow position: | chr28:15224866-15224633 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 43-294 |
| Cow position: | chr28:23621291-23621543 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 33, 160 |
| Conread position: | 45-269 |
| Cow position: | chr28:23231321-23231090 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 33, 23 |
| Conread position: | 45-271 |
| Cow position: | chr28:10642274-10642041 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 45-303 |
| Cow position: | chr28:2814754-2814499 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 34, 64 |
| Conread position: | 45-306 |
| Cow position: | chr28:31972002-31971744 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 157, 37 |
| Conread position: | 46-271 |
| Cow position: | chr28:17153528-17153745 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 96, 31 |
| Conread position: | 46-308 |
| Cow position: | chr28:34878227-34877956 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 47-245 |
| Cow position: | chr28:12430356-12430558 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 47-267 |
| Cow position: | chr28:25596379-25596597 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 157 |
| Conread position: | 47-277 |
| Cow position: | chr28:9851380-9851600 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 169, 30 |
| Conread position: | 47-277 |
| Cow position: | chr28:29455910-29455674 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 47-303 |
| Cow position: | chr28:12942132-12942388 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 143, 30 |
| Conread position: | 47-303 |
| Cow position: | chr28:23007981-23007724 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 98 |
| Conread position: | 47-303 |
| Cow position: | chr28:25563823-25564091 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 47-308 |
| Cow position: | chr28:18934199-18934465 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 16, 145 |
| Conread position: | 48-264 |
| Cow position: | chr28:16386758-16386538 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 30, 98 |
| Conread position: | 51-271 |
| Cow position: | chr28:22170967-22170739 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 51-303 |
| Cow position: | chr28:16686784-16687033 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 27, 8 |
| Conread position: | 51-303 |
| Cow position: | chr28:18462861-18462602 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 27, 10 |
| Conread position: | 53-269 |
| Cow position: | chr28:17625381-17625157 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 89, 24 |
| Conread position: | 53-269 |
| Cow position: | chr28:30978035-30978248 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 53-283 |
| Cow position: | chr28:30995033-30995267 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 86, 24 |
| Conread position: | 55-305 |
| Cow position: | chr28:15677652-15677894 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 60-289 |
| Cow position: | chr28:11501132-11500892 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 63-338 |
| Cow position: | chr28:9285615-9285329 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 15, 238 |
| Conread position: | 72-303 |
| Cow position: | chr28:11006950-11007205 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 208-391 |
| Cow position: | chr28:26029425-26029245 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 55, 9 |
Show alignments to all cow chromosomes.