Cow genome map
| Conread name: | LyN2-AR060E02LN05AFE02F |
| Conread position: | 1-259 |
| Cow position: | chr29:21924904-21925168 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-303 |
| Cow position: | chr29:41530544-41530849 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 75, 186 |
| Conread position: | 7-269 |
| Cow position: | chr29:12784254-12783988 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 71, 44 |
| Conread position: | 9-197 |
| Cow position: | chr29:16662787-16662978 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 66, 120 |
| Conread position: | 11-262 |
| Cow position: | chr29:296115-295861 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 111 |
| Conread position: | 13-268 |
| Cow position: | chr29:22175399-22175654 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 125, 64 |
| Conread position: | 17-192 |
| Cow position: | chr29:109422-109596 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 59, 14 |
| Conread position: | 21-197 |
| Cow position: | chr29:7051668-7051853 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 35 |
| Conread position: | 26-308 |
| Cow position: | chr29:21534959-21534668 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 45, 64 |
| Conread position: | 32-289 |
| Cow position: | chr29:23743312-23743067 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 195 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 159, 60 |
| Conread position: | 35-303 |
| Cow position: | chr29:30812478-30812751 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 172 |
| Conread position: | 37-275 |
| Cow position: | chr29:17109700-17109942 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 35, 116 |
| Conread position: | 39-208 |
| Cow position: | chr29:22720860-22721035 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 63 |
| Conread position: | 39-263 |
| Cow position: | chr29:36404553-36404785 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 39-269 |
| Cow position: | chr29:12005032-12004793 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 117 |
| Conread position: | 39-292 |
| Cow position: | chr29:603576-603329 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 162, 38 |
| Conread position: | 42-302 |
| Cow position: | chr29:7408154-7407884 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 36, 189 |
| Conread position: | 43-269 |
| Cow position: | chr29:17131871-17131651 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 113 |
| Conread position: | 43-275 |
| Cow position: | chr29:29056919-29057153 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 43-303 |
| Cow position: | chr29:19907092-19907357 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 43-308 |
| Cow position: | chr29:13634564-13634294 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 45-269 |
| Cow position: | chr29:24952424-24952656 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 45-290 |
| Cow position: | chr29:12901370-12901118 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 112, 32 |
| Conread position: | 48-268 |
| Cow position: | chr29:11071963-11071731 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 51-264 |
| Cow position: | chr29:22162509-22162290 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 51-280 |
| Cow position: | chr29:18072673-18072913 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 21, 210 |
| Conread position: | 51-297 |
| Cow position: | chr29:34736721-34736471 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 25, 96 |
| Conread position: | 51-298 |
| Cow position: | chr29:24197887-24197645 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 20, 99 |
| Conread position: | 53-303 |
| Cow position: | chr29:13553878-13554140 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 53-303 |
| Cow position: | chr29:34700069-34699832 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 65 |
| Conread position: | 53-305 |
| Cow position: | chr29:356072-356322 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 25, 150 |
| Conread position: | 56-303 |
| Cow position: | chr29:11787541-11787799 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 97-281 |
| Cow position: | chr29:709331-709139 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 104-303 |
| Cow position: | chr29:7663467-7663269 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 118-396 |
| Cow position: | chr29:7392907-7393197 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 123-392 |
| Cow position: | chr29:36847951-36848191 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.