Cow genome map


           Conread name:
           LyN2-AR060E02LN05AFE02F
        

               Conread position:
               9-296
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               147, 67
               

               Conread position:
               11-303
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               13-258
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               67, 208
               

               Conread position:
               13-396
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 38
               

               Conread position:
               15-298
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               146, 66
               

               Conread position:
               18-269
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               21-262
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 28
               

               Conread position:
               23-190
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               55, 117
               

               Conread position:
               23-294
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               208
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               53, 156
               

               Conread position:
               24-269
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 54
               

               Conread position:
               25-268
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               51, 205
               

               Conread position:
               27-303
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               51, 244
               

               Conread position:
               27-400
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 59
               

               Conread position:
               28-303
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               120, 49
               

               Conread position:
               29-297
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               50, 104
               

               Conread position:
               30-303
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               121, 47
               

               Conread position:
               31-214
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               47, 143
               

               Conread position:
               31-303
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               47, 28
               

               Conread position:
               34-303
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               246, 41
               

               Conread position:
               34-329
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               35-255
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               43, 89
               

               Conread position:
               35-267
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               43, 67
               

               Conread position:
               36-303
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               40, 82
               

               Conread position:
               37-259
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               37-264
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               37-269
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               41, 120
               

               Conread position:
               38-278
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               38, 165
               

               Conread position:
               38-301
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               123, 30
               

               Conread position:
               39-256
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               37, 80
               

               Conread position:
               39-269
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               39-269
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 70
               

               Conread position:
               39-315
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               39, 77
               

               Conread position:
               40-262
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               40, 160
               

               Conread position:
               40-275
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               38, 157
               

               Conread position:
               41-293
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               46, 197
               

               Conread position:
               41-303
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               18, 59
               

               Conread position:
               41-303
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               37, 124
               

               Conread position:
               41-303
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               106, 40
               

               Conread position:
               42-400
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 126
               

               Conread position:
               43-197
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               113, 34
               

               Conread position:
               43-225
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               33, 159
               

               Conread position:
               43-268
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               43-277
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               43-284
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               43-300
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               33, 43
               

               Conread position:
               43-303
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               43-400
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 121
               

               Conread position:
               45-190
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               45-269
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               19, 152
               

               Conread position:
               45-306
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               32, 75
               

               Conread position:
               46-277
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               46-296
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               47-197
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               31, 99
               

               Conread position:
               47-283
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               47-301
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               31, 56
               

               Conread position:
               47-303
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               19, 72
               

               Conread position:
               48-275
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               48-303
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               28, 185
               

               Conread position:
               51-258
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               19, 158
               

               Conread position:
               51-264
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 78
               

               Conread position:
               51-279
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               27, 127
               

               Conread position:
               51-303
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               26, 231
               

               Conread position:
               51-399
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 88
               

               Conread position:
               53-271
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 214
               

               Conread position:
               53-283
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               89, 25
               

               Conread position:
               54-283
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               90, 31
               

               Conread position:
               54-284
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 77
               

               Conread position:
               55-259
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               55-301
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 141
               

               Conread position:
               55-303
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               23, 144
               

               Conread position:
               61-271
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               12, 127
               

               Conread position:
               66-273
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               68-277
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 192
               

               Conread position:
               70-253
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               85, 104
               

               Conread position:
               80-297
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               68, 51
               

               Conread position:
               81-295
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 182
               

               Conread position:
               89-268
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               67, 113
               

               Conread position:
               89-273
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               67, 109
               

               Conread position:
               92-303
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               89, 44
               

               Conread position:
               93-303
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               92, 55
               

               Conread position:
               101-315
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               123-303
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               94, 33
               

               Conread position:
               133-303
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               23, 102
               

               Conread position:
               211-389
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               69, 88
               
Show alignments to all cow chromosomes.