Cow genome map
| Conread name: | LyN2-AR060E02LN05AFE02F | 
| Conread position: | 1-303 | 
| Cow position: | chr6:48344063-48344374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 77, 207 | 
| Conread position: | 7-303 | 
| Cow position: | chr6:3118456-3118152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 76, 131 | 
| Conread position: | 9-391 | 
| Cow position: | chr6:17669052-17669416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 37, 102 | 
| Conread position: | 11-291 | 
| Cow position: | chr6:66874107-66874382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 67, 105 | 
| Conread position: | 11-303 | 
| Cow position: | chr6:56041877-56041582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 223 | 
| Conread position: | 13-199 | 
| Cow position: | chr6:20420128-20420309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 147, 44 | 
| Conread position: | 13-275 | 
| Cow position: | chr6:45065259-45065001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 65, 130 | 
| Conread position: | 15-268 | 
| Cow position: | chr6:49685334-49685592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 63, 188 | 
| Conread position: | 17-296 | 
| Cow position: | chr6:50422320-50422045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 18, 105 | 
| Conread position: | 19-279 | 
| Cow position: | chr6:6701515-6701253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 58, 179 | 
| Conread position: | 23-303 | 
| Cow position: | chr6:22968831-22969124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 45, 227 | 
| Conread position: | 23-303 | 
| Cow position: | chr6:47327311-47327027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 54, 251 | 
| Conread position: | 25-294 | 
| Cow position: | chr6:6995185-6994919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 51, 39 | 
| Conread position: | 25-316 | 
| Cow position: | chr6:10254001-10254295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 51, 36 | 
| Conread position: | 29-267 | 
| Cow position: | chr6:64436567-64436317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 42, 100 | 
| Conread position: | 29-269 | 
| Cow position: | chr6:38440945-38441185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 49, 127 | 
| Conread position: | 31-199 | 
| Cow position: | chr6:7253661-7253484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 31-280 | 
| Cow position: | chr6:56902629-56902883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 47, 176 | 
| Conread position: | 32-289 | 
| Cow position: | chr6:48573116-48572851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 46, 36 | 
| Conread position: | 34-260 | 
| Cow position: | chr6:11789767-11790002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 43, 148 | 
| Conread position: | 34-283 | 
| Cow position: | chr6:52401629-52401884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 42, 105 | 
| Conread position: | 35-303 | 
| Cow position: | chr6:44511008-44511287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 42, 203 | 
| Conread position: | 38-257 | 
| Cow position: | chr6:24781791-24781557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 38-275 | 
| Cow position: | chr6:16737793-16738035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 38-303 | 
| Cow position: | chr6:44372171-44371904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 40, 184 | 
| Conread position: | 39-257 | 
| Cow position: | chr6:11169481-11169695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 85, 49 | 
| Conread position: | 39-257 | 
| Cow position: | chr6:24327362-24327144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 120, 46 | 
| Conread position: | 39-258 | 
| Cow position: | chr6:29077502-29077726 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 39, 165 | 
| Conread position: | 39-271 | 
| Cow position: | chr6:1891072-1890834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 37, 234 | 
| Conread position: | 39-271 | 
| Cow position: | chr6:68297814-68297573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 39, 203 | 
| Conread position: | 39-273 | 
| Cow position: | chr6:42961594-42961347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 39, 200 | 
| Conread position: | 39-280 | 
| Cow position: | chr6:32121684-32121925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 39, 165 | 
| Conread position: | 39-296 | 
| Cow position: | chr6:4079610-4079354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 39, 166 | 
| Conread position: | 39-306 | 
| Cow position: | chr6:8318393-8318116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 40-272 | 
| Cow position: | chr6:12927894-12928132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 38, 147 | 
| Conread position: | 40-303 | 
| Cow position: | chr6:14850937-14850671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 152, 28 | 
| Conread position: | 43-306 | 
| Cow position: | chr6:9026294-9026568 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 43-307 | 
| Cow position: | chr6:63197394-63197118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 35, 83 | 
| Conread position: | 45-197 | 
| Cow position: | chr6:13741475-13741630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 45-257 | 
| Cow position: | chr6:10176522-10176299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 112, 201 | 
| Conread position: | 45-274 | 
| Cow position: | chr6:45160512-45160279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 45-303 | 
| Cow position: | chr6:47625180-47624920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 103, 66 | 
| Conread position: | 45-303 | 
| Cow position: | chr6:57685938-57686192 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 35, 96 | 
| Conread position: | 45-308 | 
| Cow position: | chr6:19427228-19427503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 45-399 | 
| Cow position: | chr6:12934361-12933999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 21, 209 | 
| Conread position: | 46-257 | 
| Cow position: | chr6:35435783-35435989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 27, 117 | 
| Conread position: | 46-294 | 
| Cow position: | chr6:48807219-48806961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 32, 96 | 
| Conread position: | 46-303 | 
| Cow position: | chr6:1907319-1907585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 28, 163 | 
| Conread position: | 46-303 | 
| Cow position: | chr6:41264906-41265162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 113, 35 | 
| Conread position: | 47-190 | 
| Cow position: | chr6:51398582-51398729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 47-262 | 
| Cow position: | chr6:3952306-3952520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 166, 30 | 
| Conread position: | 47-275 | 
| Cow position: | chr6:34196367-34196135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 47-281 | 
| Cow position: | chr6:48281776-48282010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 31, 176 | 
| Conread position: | 47-284 | 
| Cow position: | chr6:16675603-16675826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 116, 28 | 
| Conread position: | 47-291 | 
| Cow position: | chr6:54807004-54807256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 32, 216 | 
| Conread position: | 47-293 | 
| Cow position: | chr6:60152817-60153069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 37, 231 | 
| Conread position: | 47-303 | 
| Cow position: | chr6:7824544-7824807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 104, 64 | 
| Conread position: | 47-303 | 
| Cow position: | chr6:23986953-23986704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 29, 87 | 
| Conread position: | 47-303 | 
| Cow position: | chr6:35415740-35415474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 52 | 
| Conread position: | 47-306 | 
| Cow position: | chr6:38018055-38018306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 33, 95 | 
| Conread position: | 47-306 | 
| Cow position: | chr6:58315830-58316093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 109, 30 | 
| Conread position: | 48-203 | 
| Cow position: | chr6:38594722-38594561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 48-257 | 
| Cow position: | chr6:8804745-8804533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 48-270 | 
| Cow position: | chr6:55842378-55842146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 28, 77 | 
| Conread position: | 48-278 | 
| Cow position: | chr6:20255604-20255381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 30, 84 | 
| Conread position: | 48-303 | 
| Cow position: | chr6:16625730-16625984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 28, 154 | 
| Conread position: | 48-303 | 
| Cow position: | chr6:28164577-28164842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 30, 85 | 
| Conread position: | 48-303 | 
| Cow position: | chr6:31425781-31425519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 30, 180 | 
| Conread position: | 51-257 | 
| Cow position: | chr6:25773596-25773391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 27, 136 | 
| Conread position: | 51-280 | 
| Cow position: | chr6:2582660-2582890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 27, 17 | 
| Conread position: | 51-290 | 
| Cow position: | chr6:47026267-47026507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 25, 120 | 
| Conread position: | 53-296 | 
| Cow position: | chr6:33851996-33851760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 103, 25 | 
| Conread position: | 53-303 | 
| Cow position: | chr6:827919-827662 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 25, 34 | 
| Conread position: | 53-307 | 
| Cow position: | chr6:32677285-32677037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 103, 24 | 
| Conread position: | 53-308 | 
| Cow position: | chr6:56376560-56376302 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 107, 24 | 
| Conread position: | 54-303 | 
| Cow position: | chr6:13592498-13592750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 24, 122 | 
| Conread position: | 54-303 | 
| Cow position: | chr6:24515405-24515157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 25, 150 | 
| Conread position: | 55-292 | 
| Cow position: | chr6:6367873-6367636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 22, 63 | 
| Conread position: | 56-259 | 
| Cow position: | chr6:50800616-50800410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 21, 115 | 
| Conread position: | 56-263 | 
| Cow position: | chr6:10422964-10423168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 22, 145 | 
| Conread position: | 59-307 | 
| Cow position: | chr6:14658400-14658647 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 89, 118 | 
| Conread position: | 60-303 | 
| Cow position: | chr6:24545411-24545655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 18, 91 | 
| Conread position: | 60-316 | 
| Cow position: | chr6:6098488-6098226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 18, 256 | 
| Conread position: | 65-303 | 
| Cow position: | chr6:65871698-65871931 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 80, 132 | 
| Conread position: | 66-298 | 
| Cow position: | chr6:36652222-36652460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 81, 11 | 
| Conread position: | 66-303 | 
| Cow position: | chr6:31635886-31635647 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 10, 27 | 
| Conread position: | 67-303 | 
| Cow position: | chr6:24223360-24223113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 70-307 | 
| Cow position: | chr6:3545510-3545740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 125, 59 | 
| Conread position: | 95-278 | 
| Cow position: | chr6:37739017-37739205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 64, 173 | 
| Conread position: | 101-303 | 
| Cow position: | chr6:24623140-24622932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 41, 153 | 
| Conread position: | 105-303 | 
| Cow position: | chr6:47204314-47204521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 118-264 | 
| Cow position: | chr6:65852689-65852542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 38, 75 | 
| Conread position: | 121-375 | 
| Cow position: | chr6:52731290-52731050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 40, 110 | 
| Conread position: | 219-396 | 
| Cow position: | chr6:10705374-10705195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 17, 8 | 
Show alignments to all cow chromosomes.
