Cow genome map

Conread name: LyN2-AR060E02LN05AFE02F

Conread position: 7-270
Cow position: chr8:58385380-58385652 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 104

Conread position: 7-303
Cow position: chr8:44664872-44664562 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 303

Conread position: 11-264
Cow position: chr8:42578358-42578103 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 65, 75

Conread position: 13-257
Cow position: chr8:47136293-47136043 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 81, 193

Conread position: 14-154
Cow position: chr8:26877169-26877311 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 5, 90

Conread position: 15-302
Cow position: chr8:10263443-10263154 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 79, 62

Conread position: 17-278
Cow position: chr8:24868024-24867755 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 55, 191

Conread position: 19-303
Cow position: chr8:60320246-60320534 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 54, 185

Conread position: 22-308
Cow position: chr8:53865830-53866127 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 232

Conread position: 23-293
Cow position: chr8:16023908-16023637 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 125, 54

Conread position: 23-303
Cow position: chr8:1107462-1107177 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 124, 176

Conread position: 25-297
Cow position: chr8:13975628-13975901 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 123, 52

Conread position: 27-284
Cow position: chr8:9131195-9130935 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 51, 149

Conread position: 29-303
Cow position: chr8:31313626-31313909 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 49, 200

Conread position: 29-303
Cow position: chr8:36505104-36505392 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 102, 37

Conread position: 30-303
Cow position: chr8:47678257-47678525 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 137

Conread position: 32-303
Cow position: chr8:49265572-49265290 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 33-280
Cow position: chr8:10456209-10456456 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 153, 43

Conread position: 33-281
Cow position: chr8:55925936-55926191 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 177

Conread position: 33-303
Cow position: chr8:33286905-33287176 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 118

Conread position: 35-271
Cow position: chr8:11590672-11590909 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 112, 41

Conread position: 35-284
Cow position: chr8:1472801-1473054 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 167
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 11, 61

Conread position: 37-270
Cow position: chr8:33432000-33432230 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 165

Conread position: 37-272
Cow position: chr8:26600307-26600534 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 71

Conread position: 37-278
Cow position: chr8:48763305-48763545 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 111, 40

Conread position: 38-187
Cow position: chr8:33400447-33400300 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 107
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 39-268
Cow position: chr8:33974318-33974536 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 76

Conread position: 39-269
Cow position: chr8:23179802-23179564 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 54

Conread position: 39-273
Cow position: chr8:18049347-18049582 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 185

Conread position: 39-306
Cow position: chr8:25871467-25871743 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 254

Conread position: 40-295
Cow position: chr8:55829593-55829342 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 38, 157

Conread position: 40-380
Cow position: chr8:3433620-3433962 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 176

Conread position: 41-270
Cow position: chr8:45664520-45664755 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 151
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 43-187
Cow position: chr8:27955688-27955541 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 44-299
Cow position: chr8:42889384-42889134 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 33, 58

Conread position: 45-259
Cow position: chr8:3147788-3147572 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 31, 71

Conread position: 45-275
Cow position: chr8:24933902-24934139 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 45, 84

Conread position: 45-289
Cow position: chr8:32984358-32984104 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 45-290
Cow position: chr8:41264064-41264307 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 111, 22

Conread position: 45-298
Cow position: chr8:39808312-39808568 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 94

Conread position: 45-302
Cow position: chr8:11249709-11249465 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 36, 91

Conread position: 45-303
Cow position: chr8:31253560-31253825 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 26, 240

Conread position: 45-303
Cow position: chr8:55304825-55305093 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 33, 164

Conread position: 45-306
Cow position: chr8:39936252-39936529 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 33, 0

Conread position: 47-269
Cow position: chr8:19430089-19429871 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 31, 99

Conread position: 47-269
Cow position: chr8:36375760-36375536 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 60

Conread position: 47-280
Cow position: chr8:29262534-29262766 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 147

Conread position: 47-281
Cow position: chr8:16487551-16487315 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 143, 29

Conread position: 47-283
Cow position: chr8:54195291-54195528 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 31, 188

Conread position: 47-286
Cow position: chr8:46203038-46203264 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 144, 97

Conread position: 47-293
Cow position: chr8:11637875-11638133 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 101, 31

Conread position: 47-303
Cow position: chr8:966627-966900 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 258

Conread position: 47-400
Cow position: chr8:4161275-4160918 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 230

Conread position: 48-253
Cow position: chr8:2953387-2953596 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 154

Conread position: 48-274
Cow position: chr8:60454948-60455174 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 153
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 31, 156

Conread position: 51-228
Cow position: chr8:47861182-47861001 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 108

Conread position: 51-271
Cow position: chr8:29416578-29416356 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 56

Conread position: 51-277
Cow position: chr8:36364292-36364065 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 27, 79

Conread position: 51-279
Cow position: chr8:37571951-37571716 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 52

Conread position: 51-283
Cow position: chr8:28263161-28262926 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 159
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 100, 50

Conread position: 51-303
Cow position: chr8:12538842-12538595 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 19, 93

Conread position: 51-303
Cow position: chr8:30135671-30135935 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 51-378
Cow position: chr8:29028326-29027985 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 36

Conread position: 53-271
Cow position: chr8:51905287-51905061 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 54-264
Cow position: chr8:42575451-42575672 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 54-284
Cow position: chr8:7599470-7599686 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 80, 22

Conread position: 54-291
Cow position: chr8:51959647-51959398 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 23, 0

Conread position: 54-303
Cow position: chr8:26228717-26228967 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 166
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 22, 80

Conread position: 54-344
Cow position: chr8:28412853-28412557 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 197
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 75

Conread position: 56-268
Cow position: chr8:24834488-24834693 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 22, 131

Conread position: 56-274
Cow position: chr8:24546292-24546510 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 21, 103

Conread position: 56-281
Cow position: chr8:34410214-34410440 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 27, 22

Conread position: 59-284
Cow position: chr8:28509728-28509490 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 61-293
Cow position: chr8:20683738-20683974 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 25, 64

Conread position: 64-267
Cow position: chr8:45690130-45689924 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 96, 50

Conread position: 67-290
Cow position: chr8:52195693-52195921 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 89, 0

Conread position: 70-271
Cow position: chr8:25572829-25573036 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 70-297
Cow position: chr8:5219718-5219495 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 65, 133

Conread position: 81-303
Cow position: chr8:45486397-45486614 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 119

Conread position: 82-303
Cow position: chr8:31690590-31690821 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 92-267
Cow position: chr8:35504437-35504260 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 110

Conread position: 92-303
Cow position: chr8:28221769-28221550 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 54, 0

Conread position: 94-259
Cow position: chr8:20131625-20131800 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 121-303
Cow position: chr8:29935748-29935928 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 74, 98

Conread position: 123-303
Cow position: chr8:59507248-59507065 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 13

Conread position: 142-303
Cow position: chr8:13738349-13738513 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 152

Conread position: 166-303
Cow position: chr8:31815171-31815031 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 188-404
Cow position: chr8:3880507-3880297 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 98

Show alignments to all cow chromosomes.